Job Description Undefined Confidence 99.94% Date Thu Nov 13 08:26:15 GMT 2025 Rank 400 Aligned Residues 268 % Identity 11% Template c5cbkA_ PDB info PDB header: signaling protein Chain: A: PDB Molecule: ShHTL5 PDBTitle: crystal structure of the strigolactone receptor shhtl5 from striga hermonthica PDB Entry: PDBe RCSB PDBj Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

35

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40

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50

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60

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70

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80

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90

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Predicted Secondary structure

Query Sequence

E

Q

V

G

D

V

K

V

F

Y

R

E

A

G

D

P

A

A

P

A

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L

L

L

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S

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Y

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A

D

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Y

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A

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D

L

P

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F

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Y

T

E

A

Query Conservation

Alig confidence

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Template Conservation

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Template Sequence

M

S

T

V

G

S

A

H

N

V

T

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L

G

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S

G

E

T

T

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L

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Y

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N

M

G

A

G

T

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D

P

Template Known Secondary structure

T

T

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S

S

T

T

G

G

G

G

T

T

T

G

G

G

T

T

T

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S

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T

T

S

T

T

S

G

Template Predicted Secondary structure

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95

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100

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110

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120

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130

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140

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150

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Predicted Secondary structure

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Query Sequence

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A

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R

G

Q

Y

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T

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P

S

R

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T

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S

Q

N

Query Conservation

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Alig confidence

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Template Conservation

Template Sequence

N

L

Y

D

F

E

R

Y

S

S

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S

Template Known Secondary structure

G

G

T

T

G

G

G

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T

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T

G

G

G

S

Template Predicted Secondary structure

154

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160

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170

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180

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190

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200

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210

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Predicted Secondary structure

Query Sequence

G

N

A

Y

E

E

G

L

S

A

G

W

E

P

I

R

K

Y

W

N

D

P

T

A

E

N

R

Q

A

L

S

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F

P

T

P

A

S

I

K

W

Q

Y

V

E

G

V

S

D

T

S

L

V

A

P

D

A

Y

T

L

Query Conservation

Alig confidence

Template Conservation

Template Sequence

A

C

P

R

V

A

N

A

D

D

Y

Y

G

G

F

E

E

E

D

V

N

Q

L

Y

G

A

M

E

E

N

F

Q

T

M

M

T

G

Y

A

P

I

V

V

G

G

D

L

E

S

E

A

M

Q

E

F

S

R

T

L

F

Template Known Secondary structure

S

S

B

B

T

T

B

S

B

S

S

S

T

Template Predicted Secondary structure

214

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220

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230

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240

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250

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260

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270

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Predicted Secondary structure

Query Sequence

E

G

A

Q

I

L

R

P

G

M

A

D

I

Q

L

D

L

L

L

D

Y

A

T

N

V

E

Q

Y

P

A

F

Q

A

Y

F

R

E

Y

Q

P

P

L

L

A

V

W

G

E

H

D

P

F

F

L

P

P

G

A

E

A

Query Conservation

Alig confidence

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Template Conservation

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Template Sequence

N

M

R

P

D

I

A

L

S

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C

R

M

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G

Y

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D

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C

H

I

I

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S

S

K

D

K

L

V

P

V

A

V

A

E

Y

Template Known Secondary structure

T

S

T

T

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G

G

G

G

G

G

S

S

S

S

Template Predicted Secondary structure

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274

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280

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290

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300

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310

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Predicted Secondary structure

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Query Sequence

W

K

R

D

I

P

D

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A

D

I

.

R

L

Y

D

T

G

H

F

A

L

E

T

H

S

E

V

I

I

P

T

I

R

Q

F

L

D

D

H

V

S

L

H

Query Conservation

.

.

Alig confidence

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.

Template Conservation

Template Sequence

L

H

R

N

F

G

G

K

S

V

V

E

L

I

P

T

E

G

H

L

P

H

L

S

A

P

D

I

T

I

P

V

L

I

R

H

I

N

Q

D

I

A

D

D

Template Known Secondary structure

S

S

S

S

.

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.

Template Predicted Secondary structure

No model constructed - rank, confidence too low

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
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