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Job DescriptionUndefined
Confidence99.91%DateThu Nov 13 08:26:15 GMT 2025
Rank436Aligned Residues233
% Identity12%Templatec3dkrA_
PDB info PDB header: hydrolaseChain: A: PDB Molecule: Esterase D PDBTitle: snapshots of esterase d from lactobacillus rhamnosus: insights into a rotation driven catalytic mechanism
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70....... ..80.........90 ....
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Query Sequence  VGDVKVFYREAGDPAAPAVLLLHGFAASSYMWRDVIEALAD. GYHVIAPDLPAFG. YTEA
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Template Sequence  FRKPQPFEYEGT. . . DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPL
Template Known Secondary structure 







S...S

TT

GGGGTT



TT
SSS
T
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   95.... 100.........110.........120.........130.........140.........150...
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Query Sequence  PARGQ. YDYTFANLTKTIERFTDQLKLTRYAMAVHDYGAPVGWRLALAHPSRITAIISQN
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Template Conservation                           .     
 
 
 

  
   
              
Template Sequence  DILTKGNPDIWWAESSAAVAHMTAK. YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSS
Template Known Secondary structure 

TT.
SS
SS

SS
Template Predicted Secondary structure 




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   154.....160.........170.........180.........190.........200.........210...
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Query Sequence  GNAYEEGLSAGWEPIRKYWNDPTAENRQALSDFPTPASIKWQYVEGVSDTSLVAPDAYTL
Query Conservation                                                              
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Template Sequence  PILP. . GKHHLVPGFLKYAEYMNRLAGKSDE. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 


T..T
B
T...
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Template Predicted Secondary structure 



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   214.....220.........230.........240.........250.........260.........270...
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Query Sequence  EGAQILRPGMADIQLDLLLDYATNVEQYPAFQAYFREYQPPLLAVWGEHDPFFLPPGAEA
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Template Sequence  . . . . . . . . . STQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQ
Template Known Secondary structure  .........TGGG

S
TT
SSB
TT
Template Predicted Secondary structure  .........









   274.....280 .........290...... ...300.........310...
Predicted Secondary structure 


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Query Sequence  WKRDIPD. . . . ADIRLYDTGHFALETH. SEVIIPTIRQFLDDHVS
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Template Conservation                      
              
         
Template Sequence  LRDALINAARVDFHWYDDAKHVITVNSAHHALEEDVIAFMQQENE
Template Known Secondary structure 
TT
S
TT

S
TTTSTTTT

Template Predicted Secondary structure 
















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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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