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Job DescriptionUndefined
Confidence99.96%DateThu Nov 13 08:26:15 GMT 2025
Rank303Aligned Residues241
% Identity14%Templatec3bf8A_
PDB info PDB header: hydrolaseChain: A: PDB Molecule: Esterase YbfF PDBTitle: ;1.1 resolution structure of ybff, a new esterase from escherichia coli: a unique substrate-binding crevice generated by domain arrangement;
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.
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Query Sequence  VFYREAGDPAAPAVLLLHGFAASSYMWRDVIEALADGYHVIAPDLPAFGYTEAPARGQYD
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Template Conservation               

  

              
     
   
  
 
 
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Template Sequence  RAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREP. . . . V
Template Known Secondary structure 

SS







TT

TTTTTTTS
..TTSTTS..
S....
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   102.......110.........120.........130.........140.........150.........160.
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Query Sequence  YTFANLTKTIERFTDQLKLTRYAMAVHDYGAPVGWRLALAHPSRITAIISQNGNAYEEGL
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Template Conservation                         
 
 
 

  
   
      
   
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Template Sequence  MNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVD. . .
Template Known Secondary structure 

T
S
T
GGGS

SS
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   162.......170.........180.........190.........200.........210.........220.
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Query Sequence  SAGWEPIRKYWNDPTAENRQALSDFPTPASIKWQYVEGVSDTSLVAPDAYTLEGAQILRP
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Template Conservation  ......................                                      
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . YHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEE
Template Known Secondary structure  ......................

S


S


STTT


Template Predicted Secondary structure  ......................










   222.......230.........240..... ....250.........260.........270...
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Query Sequence  GMADIQLDLLLDYATNVEQYPAFQ. . . . . . . . AYFREYQPPLLAVWGEHDPFFLPPGAEA
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Template Conservation                                          
 
   
  
          
Template Sequence  GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDD
Template Known Secondary structure  TTTTSS
TS







S

BTT
STT
GGG
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   274.....280... ......290.........300.........310.
Predicted Secondary structure 



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Query Sequence  WKRDIPDADI. RLYDTGHFALETHSEVIIPTIRQFLDDH
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Template Conservation                   
             
   
   
Template Sequence  LLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDH
Template Known Secondary structure 
TT

BTT

S

T
Template Predicted Secondary structure 
















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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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