Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence99.96%DateThu Nov 13 08:26:15 GMT 2025
Rank202Aligned Residues297
% Identity13%Templatec2y6uA_
PDB info PDB header: hydrolaseChain: A: PDB Molecule: PEROXISOMAL MEMBRANE PROTEIN LPX1 PDBTitle: peroxisomal alpha-beta-hydrolase lpx1 (yor084w) from saccharomyces cerevisiae (crystal form ii)
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50. . .......60.........70....
Predicted Secondary structure 













....
.....






Query Sequence  ASAAPQVHYRVEQVGDVKVFYREAGDPA. . . . A. . . . . PAVLLLHGFAASSYMWRDVIEA
Query Conservation           
    

  
 
   
   .... .....
 





              
Alig confidence 



























....
.....





















Template Conservation                                          

  

              
Template Sequence  SASWPRAPQSTLATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVVWEYYLPR
Template Known Secondary structure 


SS
STTSB








S
TTT

TT


TT

GGGGGGGGGG
Template Predicted Secondary structure 

































   75. . ..80.........90........ .100.........110.........120.
Predicted Secondary structure  ..
......















..








...
Query Sequence  LA. . D. . . . . . GYHVIAPDLPAFGYTEAPARG. . QYDYTFANLTKTIERFTDQLKLT. . .
Query Conservation 
 .. ......   


 
  
 
 
      ..                       ...
Alig confidence 

..
......




















..




















.
...
Template Conservation 
             
   
  
 
 
                             .    
Template Sequence  LVAADAEGNYAIDKVLLIDQVNHGDSAVRNRGRLGTNFNWIDGARDVLKIATELG. SIDS
Template Known Secondary structure  S


BTTTT

TTSTTTTB
S






.SSTT
Template Predicted Secondary structure 































.



   122.......130.........140.........150.........160... ......170.. .
Predicted Secondary structure  ...
















.....
Query Sequence  . . . RYAMAVHDYGAPVGWRLALAHPSRITAIISQNGNAYEEGLSA. . . . GWEPIRKYW. N
Query Conservation  ...         

             
  


            ....         . 
Alig confidence  ...









































....








.
Template Conservation        
 
 
 

      
   
      
                            
Template Sequence  HPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAIGAGRPGLPPDSPQIPE
Template Known Secondary structure 
ST
TTS
SS


S




S


TT

TT




Template Predicted Secondary structure 





































   174.....180.........190.........200.........210......... 220.........230
Predicted Secondary structure 










...



Query Sequence  DPTAENRQALSDFPTPASIKWQYVEGVSDTSLVAPDAYTLEGAQIL. . . RPGMADIQLDL
Query Conservation                                                ...           
Alig confidence 








.



































...










Template Conservation           .                                                  
Template Sequence  NLYNSLRLK. TDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKGPVRTKMEQAQN
Template Known Secondary structure  T.

SSTSTTTTS



SS
Template Predicted Secondary structure 



.
























   231........240.........250.........260.........270.........280... ......
Predicted Secondary structure 















.


Query Sequence  LLDYATNVEQYPAFQAYFREYQPPLLAVWGEHDPFFLPPGAEAWKRDIPDADI. RLYDTG
Query Conservation                      
  
 


 
  
               
    .     
Alig confidence 


































.
















.





Template Conservation                         
 
 
 
  
  .                        
Template Sequence  LLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNW. PPQNQLFLQKTLQNYHLDVIPGGS
Template Known Secondary structure  TTS
GGGTGGG

STT


.

SSTT

Template Predicted Secondary structure 













.








   290.........300.........310.........320...
Predicted Secondary structure 













Query Sequence  HFALETHSEVIIPTIRQFLDDHVSLHRQEGAHAK
Query Conservation 
    
 
      
  

           
   
Alig confidence 

































Template Conservation 
             
   
               
Template Sequence  HLVNVEAPDLVIERINHHIHEFVLTSPLQSSHIP
Template Known Secondary structure  TTSS







Template Predicted Secondary structure 
















Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D