Job Description Undefined Confidence 99.76% Date Thu Nov 13 08:26:15 GMT 2025 Rank 406 Aligned Residues 182 % Identity 16% Template c2qs9A_ PDB info PDB header: structural protein Chain: A: PDB Molecule: Retinoblastoma-binding protein 9 PDBTitle: crystal structure of the human retinoblastoma-binding protein 9 (rbbp-9). nesg target hr2978 PDB Entry: PDBe RCSB PDBj Resolution UNK

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																.	.	.	.													.	.
Query Sequence		A	A	P	A	V	L	L	L	H	G	F	A	A	S	.	.	.	.	S	Y	M	W	R	D	V	I	E	A	L	A	.	.	D	G	Y	H	V	I	A	P	D	L	P	A	F	G	Y	T	E	A	P	A	R	G	Q	Y	D	Y	T	F
Query Conservation																.	.	.	.													.	.
Alig confidence																.	.	.	.													.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	S	K	A	V	I	V	P	G	N	G	G	G	D	V	T	T	H	G	W	Y	G	W	V	K	K	E	L	E	K	I	P	G	F	Q	C	L	A	K	N	.	.	.	.	.	.	.	.	.	.	.	P	D	P	I	T	A	R	E
Template Known Secondary structure												S	S	S	S		T	T	T	S	T	T									T	T	S	T	T								.	.	.	.	.	.	.	.	.	.	.	S	S	T	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query Sequence		A	N	L	T	K	T	I	E	R	F	T	D	Q	L	K	L	T	R	Y	A	M	A	V	H	D	Y	G	A	P	V	G	W	R	L	A	L	A	H	P	S	R	I	T	A	I	I	S	Q	N	G	N	A	Y	E	E	G	L	S	A	G
Query Conservation
Alig confidence								.					.	.																			.						.	.																.	.	.	.	.	.
Template Conservation								.					.	.																			.						.	.																.	.	.	.	.	.
Template Sequence		S	I	W	L	P	F	.	E	T	E	L	.	.	H	C	D	E	K	T	I	I	I	G	H	S	S	G	A	I	A	A	.	R	Y	A	E	T	.	.	H	R	V	Y	A	I	V	L	V	S	A	Y	T	S	D	.	.	.	.	.	.
Template Known Secondary structure					T	T		.	S	S	S	S	.	.				T	T							T							.	S					.	.	S			S						S			S	S		.	.	.	.	.	.
Template Predicted Secondary structure								.					.	.																			.						.	.																.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query Sequence		W	E	P	I	R	K	Y	W	N	D	P	T	A	E	N	R	Q	A	L	S	D	F	P	T	P	A	S	I	K	W	Q	Y	V	E	G	V	S	D	T	S	L	V	A	P	D	A	Y	T	L	E	G	A	Q	I	L	R	P	G	M	A
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query Sequence		D	I	Q	L	D	L	L	L	D	Y	A	T	N	V	E	Q	Y	P	A	F	Q	A	Y	F	R	E	Y	Q	P	P	L	L	A	V	W	G	E	H	D	P	F	F	L	P	P	G	A	E	A	W	K	R	D	I	P	D	A	D	I	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	G	D	E	N	E	R	A	S	G	Y	F	T	R	P	W	Q	W	E	K	I	K	A	N	C	P	Y	I	V	Q	F	G	S	T	D	D	P	F	L	P	W	K	E	Q	Q	E	V	A	D	R	L	E	T	K	L	H	K
Template Known Secondary structure		.	.	.	T	T							T	S	T	T	S	S												S								T	T		S	S	S													T
Template Predicted Secondary structure		.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query Sequence		L	Y	D	T	G	H	F	A	L	E	T	H	S	E	V	I	I	P	T	I	R	Q	F	L	D	D	H	V	S	L	H	R	Q	E	G
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		F	T	D	C	G	H	F	Q	N	T	E	F	H	E	L	I	.	T	V	V	K	S	L	L	K	V	P	A	L	E	H	H	H	H	H
Template Known Secondary structure			S	S		T	T	S		S	S							.								T		.	.	.	.
Template Predicted Secondary structure																		.

No model constructed - rank, confidence too low

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
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