Job Description Undefined Confidence 99.94% Date Thu Nov 13 08:26:15 GMT 2025 Rank 350 Aligned Residues 267 % Identity 12% Template c1womA_ PDB info PDB header: signaling protein Chain: A: PDB Molecule: Sigma factor sigB regulation protein rsbQ PDBTitle: crystal structure of rsbq PDB Entry: PDBe RCSB PDBj Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

34

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40

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50

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60

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70

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80

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90

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Predicted Secondary structure

Query Sequence

V

E

Q

V

G

D

V

K

V

F

Y

R

E

A

G

D

P

A

A

P

A

V

L

L

L

H

G

F

A

A

S

S

Y

M

W

R

D

V

I

E

A

L

A

D

G

Y

H

V

I

A

P

D

L

P

A

F

G

Y

T

E

Query Conservation

Alig confidence

.

Template Conservation

.

Template Sequence

H

M

T

S

I

L

S

R

N

H

V

K

V

K

G

S

.

G

K

A

S

I

M

F

A

P

G

F

G

C

D

Q

S

V

W

N

A

V

A

P

A

F

E

E

D

H

R

V

I

L

F

D

Y

V

G

S

G

H

S

D

Template Known Secondary structure

T

T

.

S

S

T

T

G

G

G

G

T

T

T

G

G

G

G

T

T

T

S

S

S

S

S

Template Predicted Secondary structure

.

94

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100

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110

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120

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130

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140

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150

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Predicted Secondary structure

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Query Sequence

A

P

A

R

G

Q

Y

D

Y

.

T

F

A

N

L

T

K

T

I

E

R

F

T

D

Q

L

K

L

T

R

Y

A

M

A

V

H

D

Y

G

A

P

V

G

W

R

L

A

L

A

H

P

S

R

I

T

A

I

I

S

Q

Query Conservation

.

Alig confidence

.

Template Conservation

Template Sequence

L

R

A

Y

D

L

N

R

Y

Q

T

L

D

G

Y

A

Q

D

V

L

D

V

C

E

A

L

D

L

K

E

T

V

F

V

G

H

S

V

G

A

L

I

G

M

L

A

S

I

R

R

P

E

L

F

S

H

L

V

M

V

Template Known Secondary structure

T

T

T

T

G

G

G

S

T

T

S

T

G

G

G

Template Predicted Secondary structure

153

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160

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170

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180

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190

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200

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210

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Predicted Secondary structure

Query Sequence

N

G

N

A

Y

E

E

G

L

S

A

G

W

E

P

I

R

K

Y

W

N

D

P

T

A

E

N

R

Q

A

L

S

D

F

P

T

P

A

S

I

K

W

Q

Y

V

E

G

V

S

D

T

S

L

V

A

P

D

A

Y

T

Query Conservation

Alig confidence

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Template Conservation

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Template Sequence

G

P

S

P

C

Y

L

N

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D

P

P

E

Y

Y

G

G

F

E

E

E

Q

L

L

G

L

L

E

M

M

E

K

N

Y

I

G

W

A

T

V

F

A

A

T

V

L

N

Q

P

D

Template Known Secondary structure

S

S

B

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T

T

T

S

B

T

T

Template Predicted Secondary structure

.

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213

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220

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230

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240

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250

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260

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.

270

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.

Predicted Secondary structure

Query Sequence

L

E

G

A

Q

I

L

R

P

G

M

A

D

I

Q

L

D

L

L

L

D

Y

A

T

N

V

E

Q

Y

P

A

F

Q

A

Y

F

R

E

Y

Q

P

P

L

L

A

V

W

G

E

H

D

P

F

F

L

P

P

G

A

E

Query Conservation

Alig confidence

Template Conservation

Template Sequence

R

P

E

I

K

E

E

L

E

S

R

F

C

S

T

D

P

V

I

A

R

Q

F

A

K

A

A

F

F

S

D

H

R

E

D

L

S

K

V

T

V

P

S

L

I

L

Q

C

A

D

D

I

I

A

P

A

T

V

G

K

Template Known Secondary structure

S

S

T

T

S

T

S

S

S

Template Predicted Secondary structure

273

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280

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290

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300

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.

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.

310

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.

Predicted Secondary structure

.

Query Sequence

A

W

K

R

D

I

P

D

A

D

I

.

R

L

Y

D

T

G

H

F

A

L

E

T

H

S

E

V

I

I

P

T

I

R

Q

F

L

D

D

H

V

Query Conservation

.

Alig confidence

.

Template Conservation

Template Sequence

Y

M

H

Q

H

L

P

Y

S

S

L

K

Q

M

E

A

R

G

H

C

P

H

M

S

H

P

D

E

T

I

Q

L

I

G

D

Y

L

K

A

H

V

Template Known Secondary structure

S

S

S

S

S

Template Predicted Secondary structure

No model constructed - rank, confidence too low

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
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