Job Description Undefined Confidence 99.88% Date Thu Nov 13 08:26:15 GMT 2025 Rank 296 Aligned Residues 213 % Identity 16% Template c1ufoD_ PDB info PDB header: hydrolase Chain: D: PDB Molecule: hypothetical protein TT1662 PDBTitle: crystal structure of tt1662 from thermus thermophilus PDB Entry: PDBe RCSB PDBj Resolution UNK

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		30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure								.																																											.
Query Sequence		V	H	Y	R	V	E	.	Q	V	G	D	V	K	V	F	Y	R	E	A	G	D	P	A	A	P	A	V	L	L	L	H	G	F	A	A	S	S	Y	M	W	R	D	V	I	E	A	L	A	D	.	G	Y	H	V	I	A	P	D	L	P
Query Conservation								.																																											.
Alig confidence								.															.																												.
Template Conservation																							.
Template Sequence		V	R	T	E	R	L	T	T	L	A	G	L	S	V	L	A	R	I	P	E	A	.	P	K	A	L	L	L	A	L	H	G	L	Q	G	S	K	E	H	I	L	A	L	L	P	G	Y	A	E	R	G	F	L	L	L	A	F	D	A	P
Template Known Secondary structure									.		T	T									S	S	.											T	T									T	S	T	T	T	G	G	G	T							.	.	T
Template Predicted Secondary structure																							.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.													.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		A	F	G	Y	T	E	A	P	A	R	G	Q	Y	D	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	F	A	N	L	T	K	T	I	E	R	F	T	D	Q	L	K	L	T	R	Y	A	M	.	A	V	H	D	Y	G	A	P	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																	.						.
Template Conservation																																														.
Template Sequence		R	H	G	E	R	E	G	P	P	P	S	S	K	S	P	R	Y	V	E	E	V	Y	R	V	A	L	G	F	K	E	E	A	R	R	V	A	E	E	A	E	R	R	F	G	.	L	P	L	F	L	L	A	G	G	S	L	G	A	F	V
Template Known Secondary structure		T	S	T	T	S	S		.	.	.		T	T	S	T	T																													.						.				T
Template Predicted Secondary structure																																														.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query Sequence		G	W	R	L	A	L	A	H	P	S	R	I	T	A	I	I	S	Q	N	G	N	A	Y	E	E	G	L	S	A	G	W	E	P	I	R	K	Y	W	N	D	P	T	A	E	N	R	Q	A	L	S	D	F	P	T	P	A	S	I	K	W
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	H	L	L	L	A	E	G	F	R	P	R	G	V	L	A	F	I	G	S	G	F	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T				S						S			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query Sequence		Q	Y	V	E	G	V	S	D	T	S	L	V	A	P	D	A	Y	T	L	E	G	A	Q	I	L	R	P	G	M	A	D	I	Q	L	D	L	L	L	D	Y	A	T	N	V	E	Q	Y	P	A	F	Q	A	Y	F	R	E	Y	Q	P	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	Q	G	Q	V	V	E	D	P	G	V	L	A	L	Y	Q	.	.	.	.	A	P	P	A	T	R	G	E	A	Y	G	G	V	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T														.	.	.	.	S		G	G	G		G	G	G	G	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.							.
Query Sequence		L	L	A	V	W	G	E	H	D	P	F	F	L	P	P	G	A	E	A	W	K	R	D	I	.	.	.	.	.	.	P	D	A	D	I	R	.	L	Y	D	T	G	H	F	A	L	E	T	H	S	E	V	I	I	P	T	I	R	Q	F
Query Conservation																										.	.	.	.	.	.							.
Alig confidence																		.								.	.	.	.	.	.							.												.
Template Conservation																		.																																.
Template Sequence		L	L	H	L	H	G	S	R	D	H	I	V	P	L	A	R	.	E	K	T	L	E	A	L	R	P	H	Y	P	E	G	R	L	A	R	F	V	E	E	G	A	G	H	T	L	T	P	L	.	A	R	V	G	L	A	F	L	E	H	W
Template Known Secondary structure								T	T		S	S	S		T	T		.								G	G	G	S		T	T	S							T	T			S	S			S		.
Template Predicted Secondary structure																		.																																.
		308	.	310	.
Predicted Secondary structure
Query Sequence		L	D	D	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	A	R
Template Known Secondary structure
Template Predicted Secondary structure

No model constructed - rank, confidence too low

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Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
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