Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank57Aligned Residues188
% Identity19%Templatec6sqgD_
PDB info PDB header: membrane proteinChain: D: PDB Molecule: viral rhodopsin OLPVRII PDBTitle: crystal structure of viral rhodopsin olpvrii
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.... .....20.........30. ........40.........50.........60....
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Query Sequence  LALGTALM. GLGTLYFLVKGMGVSDP. DAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVP
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Template Sequence  FYLTYAFLMMTTGTITFIEALRTKNEESVRHILNLETCISVVAAFFYSNFIGKLEHI. . .
Template Known Secondary structure  .TT
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.TSTT
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Template Predicted Secondary structure 






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   65....70.........80.........90....... ..100.........110......
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Query Sequence  FGGEQNPIYWARYADWLFTTPLLLLDLALLVDA. . . . . . . . DQGTILALVGADGIMIGTG
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Template Sequence  . . . NYEEINLNRYVDWAITTPIMLLVLVLAFRVNQTNKAMVKFSDFMIILGMNYGMLGTG
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   117..120.........130.........140.........150.........160.........170......
Predicted Secondary structure 



Query Sequence  LVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLW
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Template Conservation    
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Template Sequence  YLGDIGVIH. . KTMGTVLGFLFFGGLFYKLNTL. RTS. . . . . . . . NASNDLLYGAFFVLW
Template Known Secondary structure  TTSS
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Template Predicted Secondary structure 





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   177..180.........190.........200.........210.........
Predicted Secondary structure 







Query Sequence  SAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Sequence  ALYGVFYQMEQ. . . . . . . . LPRNVGYNVLDLFSKCFVGIYFWA
Template Known Secondary structure  TTS
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Template Predicted Secondary structure 


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Download:Text version FASTA version

No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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