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Job Description | Undefined | Confidence | 100.00% | Date | Mon Apr 28 15:12:51 BST 2025 |
Rank | 54 | Aligned Residues | 206 |
% Identity | 19% | Template | c9go1A_ |
PDB info |
PDB header: membrane protein | Chain: A: PDB Molecule: Archaeal-type opsin 1, Archaeal-type opsin 2 |
PDBTitle: c1c2 channelrhodopsin - smx dark structure
PDB Entry: PDBe RCSB PDBj
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Resolution | UNK |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
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Query Sequence |   |
P | E | W | I | W | L | A | L | G | T | A | L | M | G | L | G | T | L | Y | F | L | V | K | G | M | G | V | S | D | P | D | A | K | K | F | Y | A | I | T | T | L | V | P | A | I | A | F | T | M | Y | L | S | M | L | L | G | Y | G | L | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | A | N | I | L | Q | W | I | T | F | A | L | S | A | L | C | L | M | F | Y | G | Y | . |
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C | G | W | E | E | I | Y | V | A | T | I | E | M | I | K | F | I | I | . |
E | Y | F | H | E | F | D | E | P | A | V | I |
Template Predicted Secondary structure |   |
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62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
M | V | P | F | G | G | E | Q | N | P | I | Y | W | A | R | Y | A | D | W | L | F | T | T | P | L | L | L | L | D | L | A | L | L | V | D | A | D | . |
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Q | G | T | I | L | A | L | V | G | A | D | G | I | M | I | G | T | G | L | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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S | S | N | G | N | K | T | V | W | L | R | Y | A | E | W | L | L | T | C | P | V | I | L | I | H | L | S | N | L | T | G | L | A | N | D | Y | N | K | R | T | M | G | L | L | V | S | D | I | G | T | I | V | W | G | T | T |
Template Predicted Secondary structure |   |
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119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
G | A | L | T | K | V | Y | S | Y | R | F | V | W | W | A | I | S | T | A | A | M | L | Y | I | L | Y | V | L | F | F | G | F | T | S | K | A | E | S | M | R | . |
P | E | V | A | S | T | F | K | V | L | R | N | V | T | V | V | L | W | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | A | L | S | K | G | . |
Y | V | R | V | I | F | F | L | M | G | L | C | Y | G | I | Y | T | F | F | N | A | A | K | V | Y | I | E | A | Y | H | T | V | P | K | G | R | C | R | Q | V | V | T | G | M | A | W | L | F | F | V | S | W | G |
Template Predicted Secondary structure |   |
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178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
A | Y | P | V | V | W | L | I | G | S | E | G | A | G | I | V | P | L | N | I | E | T | L | L | F | M | V | L | D | V | S | A | K | V | G | F | G | L | I | L | L | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
M | F | P | I | L | F | I | L | G | P | E | G | F | G | V | L | S | V | Y | G | S | T | V | G | H | T | I | I | D | L | M | S | K | N | C | W | G | L | L | G | H | Y |
Template Predicted Secondary structure |   |
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No model constructed - rank, confidence too low
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