Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank53Aligned Residues205
% Identity20%Templatec7c86A_
PDB info PDB header: membrane proteinChain: A: PDB Molecule: Sensory opsin A, Channelrhodopsin (ChR) chimera between ChR1 & ChR2 PDBTitle: time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin: dark state structure
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  PEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLT
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Template Sequence  AANILQWITFALSALCLMFYGY. . . . . . . CGWEEIYVATIEMIKFII. EYFHEFDEPAVI
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   62.......70.........80.........90........ .100.........110........
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Query Sequence  MVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDAD. . . QGTILALVGADGIMIGTGLV
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Template Sequence  YS. . . SNGNKTVWLRYAEWLLTCPVILIHLSNLTGLANDYNKRTMGLLVSDIGTIVWGTT
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   119120.........130.........140.........150........ .160.........170.......
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Query Sequence  GALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMR. PEVASTFKVLRNVTVVLWS
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Template Sequence  AALSKG. YVRVIFFLMGLCYGIYTFFNAAKVYIEAYHTVPKGRCRQVVTGMAWLFFVSWG
Template Predicted Secondary structure  .



   178.180.........190.........200.........210........
Predicted Secondary structure 






Query Sequence  AYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILL
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Template Sequence  MFPILFILGPEGFGVLSVYGSTVGHTIIDLMSKNCWGLLGH
Template Predicted Secondary structure 






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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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