Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank24Aligned Residues206
% Identity31%Templatec3am6A_
PDB info PDB header: transport proteinChain: A: PDB Molecule: rhodopsin-2 PDBTitle: crystal structure of the proton pumping rhodopsin ar2 from marine alga acetabularia acetabulum
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60....
Predicted Secondary structure 












Query Sequence  IWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVP
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Template Sequence  IAQWIVFAIMAAAAIAFGVAVHFRP. . . LKSAYYINIAICTIAATAYYAMAVNYQDLTMN
Template Known Secondary structure  GGG
S...STTTS

BS
Template Predicted Secondary structure 



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   65....70.........80.........90.........100.........110.........120....
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Query Sequence  FGGEQNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKV
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Template Sequence  . . . GERQVVYARYIDWVLTTPLLLLDLIVMTKMGGVMISWVIGADIFMIVFGILGAFEDE
Template Known Secondary structure  ...SSBB

TTTS


T


Template Predicted Secondary structure  ...









   125....130.........140.........150.........160.........170.........180....
Predicted Secondary structure 

Query Sequence  YSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWL
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Template Sequence  HKFKWVYFIAGCVMQAVLTYGMYNATWKD. . DKSPEYHSSYVSLLVFLSILWVFYPVVWA
Template Known Secondary structure  SS..
S
T
Template Predicted Secondary structure 

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   185....190.........200.........210.........
Predicted Secondary structure 







Query Sequence  IGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Sequence  FG. SGSGVLSVDNEAILMGILDVLAKPLFGMGCLI
Template Known Secondary structure 

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SSS





Template Predicted Secondary structure  .









Download:Text version FASTA version

No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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