Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank14Aligned Residues210
% Identity46%Templatec6kfqA_
PDB info PDB header: transport proteinChain: A: PDB Molecule: Rhodopsin PDBTitle: crystal structure of thermophilic rhodopsin from rubrobacter xylanophilus
PDB Entry: PDBe RCSB PDBj
ResolutionUNK
Model Dimensions (Å)X:32.173 Y:43.562 Z:58.936

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  WLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPF
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Template Sequence  WLWIGFVGMLLGTLYFAFLLTNAP. EGTRYFFVITATITGIAAIAYLVMATGSGSTVLP.
Template Known Secondary structure  GGG...TT
TT
S

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   66...70.........80.........90....... ..100.........110.........120.
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Query Sequence  GGEQNPIYWARYADWLFTTPLLLLDLALLVDA. . . . DQGTILALVGADGIMIGTGLVGAL
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Template Sequence  . . DGREFYWARYIDWVITTPLLLLDLCLLALADPRRNVTFIASLIALDVVMILTGLWAGA
Template Known Secondary structure  ..TS



S
GGG
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   122.......130.........140.........150.........160.........170.........180.
Predicted Secondary structure 



Query Sequence  TKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPV
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Template Sequence  TVNVAGRAILFIISTAAFIGVLYLLVSRLFAEASRRTPAVAQIFRTLAVLTIVLWICYPI
Template Known Secondary structure 

S




TTS
Template Predicted Secondary structure 






   182.......190.........200... ......210.........
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Query Sequence  VWLIGSEGAGIVPLNIETLLFM. VLDVSAKVGFGLILLR
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Template Sequence  VWLIGTEGFGAVSLSVEVFLFMMVLDLLAKVGFGLLLLS
Template Known Secondary structure  STTTT
SS
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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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