Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank6Aligned Residues219
% Identity56%Templatec2ei4A_
PDB info PDB header: transport proteinChain: A: PDB Molecule: Archaerhodopsin-2 PDBTitle: trimeric complex of archaerhodopsin-2
PDB Entry: PDBe RCSB PDBj
ResolutionUNK
Model Dimensions (Å)X:42.683 Y:32.401 Z:60.511

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60
Predicted Secondary structure 














Query Sequence  RPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGL
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Template Conservation                                   
        
  
    
         
Template Sequence  RPETLWLGIGTLLMLIGTFYFIARGWGVTDKEAREYYAITILVPGIASAAYLAMFFGIGV
Template Known Secondary structure 
TTTT


TTT
Template Predicted Secondary structure 













   61.... ....70.........80.........90.........100.........110.........
Predicted Secondary structure 
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Query Sequence  TMVPF. GGEQNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVG
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Template Conservation         
    
   


 
  
 



  
  
                 

  
   
Template Sequence  TEVELASGTVLDIYYARYADWLFTTPLLLLDLALLAKVDRVTIGTLIGVDALMIVTGLIG
Template Known Secondary structure 
TTS

TT

Template Predicted Secondary structure 







   120.........130.........140.........150.........160.........170.........
Predicted Secondary structure 



Query Sequence  ALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAY
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Template Conservation                 
          
                     
       
  
Template Sequence  ALSKTPLARYTWWLFSTIAFLFVLYYLLTSLRSAAAKRSEEVRSTFNTLTALVAVLWTAY
Template Known Secondary structure  T
SSTTTS
Template Predicted Secondary structure 





   180.........190.........200.........210.........
Predicted Secondary structure 







Query Sequence  PVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Conservation 

   
   
   
           

   
  
   
  
Template Sequence  PILWIVGTEGAGVVGLGIETLAFMVLDVTAKVGFGFVLLR
Template Known Secondary structure  STTTT

S
Template Predicted Secondary structure 







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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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