Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank48Aligned Residues197
% Identity23%Templatec6eyuA_
PDB info PDB header: membrane proteinChain: A: PDB Molecule: Bacteriorhodopsin PDBTitle: crystal structure of the inward h(+) pump xenorhodopsin
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
Predicted Secondary structure 













Query Sequence  WLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPF
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Template Sequence  FILAYIITAMISGLLFLYLPRKL. . DVPQKFGIIHFFIVVWSGLMYTNFLNQ. . . . . . . .
Template Known Secondary structure  ..T

S
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Template Predicted Secondary structure 


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   66...70.........80.........90........ .100.........110.........120
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Query Sequence  GGEQNPIYWARYADWLFTTPLLLLDLALLVDAD. . . . . QGTILALVGADGIMIGTGLVGA
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Template Sequence  . . . SFLSDYAWYMDWMVSTPLILLALGLTAFHGADTKRYDLLGALLGAEFTLVITGLLAQ
Template Known Secondary structure  ...
TTGGGTT
S


Template Predicted Secondary structure  ...










   121........130.........140.........150.........160.........170.........180
Predicted Secondary structure 



Query Sequence  LTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYP
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Template Sequence  AQGSI. . . . TPYYVGVLLLLGVVYLLAKPFREIAEESSDGLARAYKILAGYIGIFFLSYP
Template Known Secondary structure  T
S....TTTS
Template Predicted Secondary structure 


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   181..... ...190.........200.........210.........
Predicted Secondary structure  .....







Query Sequence  VVWLIG. . . . . SEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Conservation 

  
        
   
          


   
         
Template Sequence  TVWYISGIDALPGSLNILDPTQTSIALVVLPFFCKQVYGFLDMY
Template Known Secondary structure  B

TTS

S


B





Template Predicted Secondary structure 













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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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