Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank21Aligned Residues211
% Identity33%Templatec8anqD_
PDB info PDB header: membrane proteinChain: D: PDB Molecule: Bacteriorhodopsin PDBTitle: crystal structure of the microbial rhodopsin from sphingomonas paucimobilis (spar)
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  EWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTM
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Template Sequence  DWMAFLIGFTIMSLASLAIYAKGSKTS. . PALHHTLLHAAVPFIAATAYLAMTFGIGTLV
Template Known Secondary structure 
S

S..TTSS
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   63......70.........80.........90....... .. 100.........110.....
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Query Sequence  VPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDA. . . DQ. . . . GTILALVGADGIMIGT
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Template Sequence  NF. . . NGSVTYLARYADWSVTTPILLASLVLLAFHERGRTGEVGGYLTAIIVLDVLMIVT
Template Known Secondary structure  T...TTTTT


TT
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   116...120.........130.........140.........150.........160.........170.....
Predicted Secondary structure 



Query Sequence  GLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVL
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Template Conservation 
                  
          
                     
       
Template Sequence  GLISSLAVVPALKWVWYLWSCAAFLGVLYLLWVPLRAMAVERGEALGTAYQKNVAFLTVI
Template Known Secondary structure 
SS




T
Template Predicted Secondary structure 






   176...180.........190.........200.........210.........
Predicted Secondary structure 







Query Sequence  WSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Sequence  WFLYPIVFLIGPEGLKIISDPTSVWAILIMDVLA. VVYAFYAAA
Template Known Secondary structure  STTTT

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S.S
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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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