Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank42Aligned Residues213
% Identity24%Templatec7o8fA_
PDB info PDB header: membrane proteinChain: A: PDB Molecule: Chloride pumping rhodopsin PDBTitle: nmhr dark state structure determined by serial femtosecond crystallography
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  WLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPF
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Template Sequence  LLTMGVGVHFAALIFFLVVSQFVA. PKYRIATALSCIVMVSAGLILNSQAVMWTDAYAYV
Template Predicted Secondary structure 

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   66. ..70.. .......80.........90........ .100.........110......
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Query Sequence  GG. . . . EQNPI. YWARYADWLFTTPLLLLDLALLVDAD. . . . QGTILALVGADGIMIGTG
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Template Sequence  DGSYQLQDLTFSNGYRYVNWMATIPCLLLQLLIVLNLKGKELFSTATWLILAAWGMIITG
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   117..120. ........130.........140.........150.........160.........170....
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Query Sequence  LVGAL. . TKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVV
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Template Conservation    
                 
   
      
                     
     
Template Sequence  YVGQLYEVDDIAQLMIWGAVSTAFFVVMNWIVGTKIFKNRATMLGGTDSTITKVFWLMMF
Template Predicted Secondary structure 





   175....180.........190.........200.........210.........
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Query Sequence  LWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Sequence  AWTLYPIAYLVPAFMNNADGVVLRQLLFTIADISSKVIYGLMITY
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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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