Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank39Aligned Residues200
% Identity26%Templatec8cnkA_
PDB info PDB header: proton transportChain: A: PDB Molecule: Green-light absorbing proteorhodopsin PDBTitle: cryo-em structure of retinal-free proteoopsin bound to decanoate
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60....
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Query Sequence  IWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVP
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Template Sequence  VSFWLVTAALLASTVFFFVERDRVS. AKWKTSLTVSGLVTGIAFWHYMYMRGVWIET. . .
Template Known Secondary structure  GGGSS
.TTTT...
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   65....70.........80.........90..... ....100.........110.........120
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Query Sequence  FGGEQNPIYWARYADWLFTTPLLLLDLALLV. . . . DADQGTILALVGADGIMIGTGLVGA
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Template Sequence  . . . . GDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGE
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   121........130.........140.........150..... ....160.........170.........
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Query Sequence  LTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKAE. SMRPEVASTFKVLRNVTVVLWSAY
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Template Sequence  AGIMA. . AWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIY
Template Known Secondary structure  TTTTT..TSSTS
TGGG
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   180.........190.........200.........210.........
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Query Sequence  PVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Sequence  PVGYFT. GYL. . . . SALNLNLIYNLADFVNKILFGLIIWN
Template Known Secondary structure  .S....






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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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