Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank20Aligned Residues212
% Identity33%Templatec3qbgA_
PDB info PDB header: membrane proteinChain: A: PDB Molecule: Halorhodopsin PDBTitle: anion-free blue form of pharaonis halorhodopsin
PDB Entry: PDBe RCSB PDBj
ResolutionUNK
Model Dimensions (Å)X:32.943 Y:58.169 Z:46.423

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  WLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPF
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Template Conservation                              
        
  

   
  
           
Template Sequence  SLYINIALAGLSILLFVFMTRGLDDPRAKLIAVSTILVPVVSIASYTGLASGLTISVLEM
Template Known Secondary structure  TTT


TTTT


Template Predicted Secondary structure 











   66.. .70.........80.........90.........100.........
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Query Sequence  . . . . . . GGE. . . . . . . . . . QNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGAD
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Template Conservation         
                  

  
 






  
  
               
Template Sequence  PAGHFAEGSSVMLGGEEVDGVVTMWGRYLTWALSTPMILLALGLLAGSNATKLFTAITFD
Template Known Secondary structure 
TT
TTTT
B

BTTB

BS
TTT

Template Predicted Secondary structure 























   110.........120... ......130.........140.........150.........160........
Predicted Secondary structure 
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Query Sequence  GIMIGTGLVGALTK. VYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVL
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Template Conservation    

  
             
     
          
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Template Sequence  IAMCVTGLAAALTTSSHLMRWFWYAISCACFIVVLYILLVEWAQDAKAAGTA. . DIFSTL
Template Known Secondary structure 

S
TT
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Template Predicted Secondary structure 






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   169170.........180.........190.........200.........210.........
Predicted Secondary structure 







Query Sequence  RNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
Query Conservation       
 
  


 
 
   
   
      
 
 



 

  

   
 
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Template Conservation         
  


   
   
   
          



  
  
   
  
Template Sequence  KLLTVVMWLGYPIVWALGVEGVAVLPVGYTSWAYSALDIVAKYIFAFLLLN
Template Known Secondary structure  STTTT
SS
T
Template Predicted Secondary structure 







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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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