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Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank58Aligned Residues188
% Identity18%Templatec6jo0A_
PDB info PDB header: membrane proteinChain: A: PDB Molecule: VirRDTS PDBTitle: crystal structure of the dts-motif rhodopsin from phaeocystis globosa virus 12t
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20 .........30.........40.........50.........60.
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Query Sequence  WLALGTALMGLGTLY. . . . FLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLT
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Template Sequence  TMIFSFLIQIITLIIGIFAQFIKVPRHK. YILKDALLLENIVQFIEAIFYLWFIYFYKE.
Template Known Secondary structure  T



GGG.






S.
Template Predicted Secondary structure 





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   62.......70.........80.........90....... ..100....
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Query Sequence  MVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDA. . . . . . . . . . . . . . . . . DQGTILA
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Template Sequence  . . . . NVDKIDIAKYRYYDWFLTTPTMILSVIIYFHYNNSSKKIYYNMITFFKQDFRKILE
Template Known Secondary structure  ....
TTTS


SS..
S
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   105....110.........120.. .......130.........140.........150.........160...
Predicted Secondary structure  .



Query Sequence  LVGADGIMIGTGLVGALT. KVYSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVAS
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Template Sequence  LWFYNFNMLIIGYLQEINIISILLSTLIGFYFFGLLFYKMFKYYVVQN. . . . . . . . . . . K
Template Known Secondary structure  TTSS





TT
...........G
Template Predicted Secondary structure 




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   164.....170.........180.........190.........200.........210........
Predicted Secondary structure 






Query Sequence  TFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILL
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Template Sequence  KNYLLFFLMFFIWGLYGIAALFNY. . . . . . . . KFKNAFYNILDIFSKNFFGLFLA
Template Known Secondary structure  GGTTS
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Template Predicted Secondary structure 


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Download:Text version FASTA version

No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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