Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank34Aligned Residues192
% Identity28%Templatec4jq6B_
PDB info PDB header: proton transportChain: B: PDB Molecule: Proteorhodopsin PDBTitle: crystal structure of blue light-absorbing proteorhodopsin from med12 at 2.3 angstrom
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.....
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Query Sequence  WLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPF
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Template Sequence  SFWLAAAIMLASTVFFFVERSDVP. VKWKTSLTVAGLVTGVAFWHYLYMRGVWIYA. . . .
Template Known Secondary structure  TTTS
.GGG




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   66...70.........80.........90.........100.........110.........120.....
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Query Sequence  GGEQNPIYWARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVY
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Template Sequence  . . . GETPTVFRYIDWLITVPLQIIEFYLIIAA. . AVFWKLLIASLVMLIGGFIGEAGLG.
Template Known Secondary structure  ...
S

S..STSS.
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   126...130.........140.........150.........160.........170.........180.....
Predicted Secondary structure 

Query Sequence  SYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLI
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Template Sequence  . DVVVWWIVGMIAWLYIIYEIFLGAAS. . . . . . . . . QQAFNTIKWIVTVGWAIYPIGYAW
Template Known Secondary structure  .
TSS.........




Template Predicted Secondary structure  ..........
   186...190.........200.........210.........
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Query Sequence  GSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Sequence  GYFG. DGLNEDALNIVYNLADLINKAAFGLAIWA
Template Known Secondary structure  SS.SS







Template Predicted Secondary structure 



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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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