Return to main results Retrieve Phyre Job Id

Job DescriptionUndefined
Confidence100.00%DateMon Apr 28 15:12:51 BST 2025
Rank45Aligned Residues214
% Identity22%Templatec3ddlA_
PDB info PDB header: transport proteinChain: A: PDB Molecule: Xanthorhodopsin PDBTitle: crystallographic structure of xanthorhodopsin, a light-driven ion pump with dual chromophore
PDB Entry: PDBe RCSB PDBj
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60....
Predicted Secondary structure 












Query Sequence  IWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVP
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Template Conservation                           .   
        
  

   
  
          
Template Sequence  NMFSFTVATMTASFVFFVLARNNVA. PKYRISMMVSALVVFIAGYHYFRITSSWEAAYAL
Template Known Secondary structure  GGGGS
.GGGT
Template Predicted Secondary structure 




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   65.. ..70.. .......80.........90........ .100.........110.....
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Query Sequence  FGG. . . . EQNPI. YWARYADWLFTTPLLLLDLALLVDAD. . . . QGTILALVGADGIMIGT
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Template Conservation          
       

  
 






  
  
                     

  
Template Sequence  QNGMYQPTGELFNDAYRYVDWLLTVPLLTVELVLVMGLPKNERGPLAAKLGFLAALMIVL
Template Known Secondary structure 
SSS
S...

S


Template Predicted Secondary structure 
















   116...120.... .....130.........140.........150.........160.........170..
Predicted Secondary structure 

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Query Sequence  GLVGALTKV. . . YSYRFVWWAISTAAMLYILYVLFFGFTSKAESMRPEVASTFKVLRNVT
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Template Conservation 
  
                  
      
   
                     
    
Template Sequence  GYPGEVSENAALFGTRGLWGFLSTIPFVWILYILFTQLGDTIQRQSSRVSTLLGNARLLL
Template Known Secondary structure  T
S


TTSS
TTS
Template Predicted Secondary structure 








   173......180.........190.........200.........210.........
Predicted Secondary structure 







Query Sequence  VVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLR
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Template Conservation     
  


   
   
              
 

  
  
   
  
Template Sequence  LATWGFYPIAYMIPMPSNTPGTIVALQVGYTIADVLAKAGYGVLIYN
Template Known Secondary structure  TTSSTT





Template Predicted Secondary structure 










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No model constructed - rank, confidence too low




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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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