Return to main results Retrieve Phyre Job Id

Job DescriptionDangers_of_Intensive
Confidence10.62%DateSun Sep 7 17:29:03 BST 2014
Rank55Aligned Residues39
% Identity10%Templatec3j20F_
PDB info PDB header:ribosomeChain: F: PDB Molecule:30s ribosomal protein s5p; PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (30s3 ribosomal subunit)
Resolution6.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.....
Predicted Secondary structure 








Query SS confidence 






































Query Sequence  VSEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELG
Query Conservation 
   
  


        
  
  




  
 
 


 
Alig confidence 






































Template Conservation 

 

      


 

 
 

 
 

 

  

 



Template Sequence  IDVLLPEVNARENQEVLDIALTVRMTDSGRRVRFRVLAA
Template Known Secondary structure 

SSSS




TT
Template Predicted Secondary structure 








Template SS confidence 






































   50.........60.........70.........80........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D