Return to main results Retrieve Phyre Job Id

Job DescriptionDangers_of_Intensive
Confidence79.98%DateSun Sep 7 17:29:03 BST 2014
Rank37Aligned Residues26
% Identity4%Templatec2bf1A_
PDB info PDB header:virus proteinChain: A: PDB Molecule:exterior membrane glycoprotein gp120; PDBTitle: structure of an unliganded and fully-glycosylated siv gp1202 envelope glycoprotein
Resolution4.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240.........250.
Predicted Secondary structure 






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Query Sequence  AKEAAVQLNTSVQINCTRPNYNKRKR
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Template Sequence  RTIISLNKYYNLTMKCRGAGWCWFGG
Template Known Secondary structure  B
B

S
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   295....300.........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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