Return to main results Retrieve Phyre Job Id

Job DescriptionDangers_of_Intensive
Confidence17.41%DateSun Sep 7 17:29:03 BST 2014
Rank45Aligned Residues56
% Identity21%Templatec3fewX_
PDB info PDB header:immune systemChain: X: PDB Molecule:colicin s4; PDBTitle: structure and function of colicin s4, a colicin with a2 duplicated receptor binding domain
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920....... ..30.........40.........50.........60.........70.......
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Query Sequence  LAVSPAAGA. SPGKPPRLVGGPMDASVEEEGVRRALDFAVSEYNKASNDMYHSRALQVVR
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Template Sequence  LVKTPVYGVPGAGGNSDVQGGYIPENPNDE. . . . . . . . . . . . VARKWDKNNLPREIDVS.
Template Known Secondary structure  GGG



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SSTTS............TTSGGGS
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   85....90.........100.........110.... .....120.........130.
 
   78.80.........90..
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Query Sequence  ARKQIVAGVNYFLDV
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Template Sequence  . . . . . IDGFKYRVTL
Template Known Secondary structure  .....TT
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   132.......140.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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