Return to main results Retrieve Phyre Job Id

Job DescriptionDangers_of_Intensive
Confidence6.29%DateSun Sep 7 17:29:03 BST 2014
Rank72Aligned Residues42
% Identity21%Templatec3om1A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:glutamate receptor gluk5 (ka2); PDBTitle: crystal structure of the gluk5 (ka2) atd dimer at 1.7 angstrom2 resolution
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.. .......50.........60.........70.......
Predicted Secondary structure 






.










Query SS confidence 






.


































Query Sequence  VGGPMDA. SVEEEGVRRALDFAVSEYNKASNDMYHSRALQVVR
Query Conservation   

    .   
  
  
  


   
  


        
  
Alig confidence 






.


































Template Conservation 

         
     
  


  

    

    
     
Template Sequence  MAAILDDQTVCGRGERLALALAREQINGIIEVPAKARVEVDIF
Template Known Secondary structure 
S
SSSS

S

SS


Template Predicted Secondary structure 














Template SS confidence 










































   7..10.........20.........30.........40.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D