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Job Description | Dangers_of_Intensive | Confidence | 96.29% | Date | Sun Sep 7 17:29:03 BST 2014 |
Rank | 27 | Aligned Residues | 33 |
% Identity | 82% | Template | c3dnlB_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:hiv-1 envelope glycoprotein gp120; |
PDBTitle: molecular structure for the hiv-1 gp120 trimer in the b12-2 bound state
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Resolution | 20.00 Å |
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226 | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | K | E | A | A | V | Q | L | N | T | S | V | Q | I | N | C | T | R | P | N | Y | N | K | R | K | R | I | H | I | G | R | G | P | G | R | A | F | Y | T | T | G | K | I | G | N | M | R | Q | A | H | C | N | I | S | R | A | K | W | N | N |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | K | T | I | I | V | Q | L | N | T | S | V | E | I | N | C | T | G | A | . |
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G | H | C | N | I | S | R | A | K | W | N | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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281 | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | |
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300 | . | . | . | . | . | . | . | . | . | 310 | . |
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286 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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341 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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