Fold library entry viewer: c3opbA_

Added to library: Sat Dec 11 14:06:52 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	L	S	E	K	G	N	D	P	I	D	S	S	T	I	D	S	L	C	A	A	F	D	K	T	L	K	S	T	P	D	V	Q	K	Y	N	D	A	I	N	T	I	F	Q	L	R	Q	K	S	E	S	G	K	M	P	A	D	L	T	N	S	E	A	L	K	D	R	Q	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S	S	S																	T	T	T	S		T	T												T	T	T	T		S	T	G	G	G				T	T	T	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	I	L	T	R	S	Y	Q	D	H	S	E	S	R	V	H	L	S	K	L	I	Q	N	D	I	P	F	A	L	N	L	F	E	I	L	S	R	S	S	I	H	V	F	V	G	C	F	S	N	K	D	A	T	I	A	L	L	N	E	L	Q	I	R	I	H	Y	G	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S															T										T	S		G	G	G						T	T			S	G	G	G	G														T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	H	V	T	Y	L	L	S	I	I	L	Q	L	L	N	K	F	K	Y	N	F	K	E	V	R	F	L	V	K	E	L	I	L	R	I	S	E	D	E	V	K	S	M	M	L	I	I	F	A	E	L	Q	S	S	F	Q	K	D	F	D	K	A	V	V	D	F	M	S	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																S				S	T	T	T	T								T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	V	E	A	E	I	D	V	G	N	D	P	L	S	I	I	V	K	T	L	S	E	L	Y	P	S	L	T	T	L	C	S	E	I	F	L	T	K	G	L	S	K	L	F	K	K	R	V	F	E	E	Q	D	L	Q	F	T	K	E	L	L	R	L	L	S	S	A	C	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		S	S														T	T	T	T									S	T	T	T											S	S																			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	T	M	R	T	Y	I	T	E	N	Y	L	Q	L	L	E	R	S	L	N	V	E	D	V	Q	I	Y	S	A	L	V	L	V	K	T	W	S	F	T	K	L	T	C	I	N	L	K	Q	L	S	E	I	F	I	N	A	I	S	R	R	I	V	P	K	V	E	M	S	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S	G	G	G												T	G	G	G	T		T	T														T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	L	A	Y	L	S	L	K	A	S	V	K	I	M	I	R	S	N	E	S	F	T	E	I	L	L	T	M	I	K	S	Q	K	M	T	H	C	L	Y	G	L	L	V	I	M	A	N	L	S	T	L	P	E	E	X	X	X	X	X	X	V	G	A	E	K	A	A	K	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S																					T	T	T			T	T												T	T														T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	L	L	F	N	E	K	Y	I	L	R	T	E	L	I	S	F	L	K	R	E	M	H	N	L	S	P	N	C	K	Q	Q	V	V	R	I	I	Y	N	I	T	R	S	K	N	F	I	P	Q	L	A	Q	Q	G	A	V	K	I	I	L	E	Y	L	A	N	K	G	E	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	T									G	G	G	S																	T	S	G	G	G							T	T									T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	I	L	G	C	R	A	L	T	R	M	L	I	F	T	N	P	G	L	I	F	K	K	Y	S	A	L	N	A	I	P	F	L	F	E	L	L	P	R	S	T	P	V	D	D	N	P	D	E	Q	I	K	L	T	D	N	Y	E	A	L	L	A	L	T	N	L	A	S	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S						S	S	S	S		S	T	T								T	S			S	S	S		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	S	D	G	E	E	V	C	K	H	I	V	S	T	K	V	Y	W	S	T	I	E	N	L	M	L	D	E	N	V	P	L	Q	R	S	T	L	E	L	I	S	N	M	M	S	H	P	L	T	I	A	A	K	F	F	N	L	E	N	P	Q	S	L	R	N	F	N	I	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													S										G	G	G		S	S																T	S	G	G	G	T	G	G	G	T	S			S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	L	L	Q	L	S	D	V	E	S	Q	R	A	V	A	A	I	F	A	N	I	A	T	T	I	P	L	I	A	K	E	L	L	T	K	K	E	L	I	E	N	A	I	Q	V	F	A	D	Q	I	D	D	I	E	L	R	Q	R	L	L	M	L	F	F	G	L	F	E	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G		S																											T	T															T	T	T																	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
Sequence	P	D	N	G	T	N	E	V	Y	P	L	L	Q	E	N	Q	K	L	K	D	A	L	N	M	S	L	K	R	G	D	S	G	P	E	F	S	A	A	I	P	V	I	L	A	K	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T	T	T	S							S													S	S	S	S	S		S	S	T	T	S							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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