PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1cz7C_

Fold library id	PDB Header	Molecule	Title
c1cz7C_	PDB header: contractile protein	Chain: C: PDB Molecule: microtubule motor protein ncd;	PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations

Links to external resources
Added to library: Tue Mar 16 12:10:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A L S T E V V H L R Q R T E E L L R C N E Q Q A A E L E T C K E Q L F Q S N M E R K E L H N T V M D L R G N I R V F C R I R P P L E S E E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R M C C T W T Y H D E S T V E L Q S I D A Q A K S K M G Q Q I F S F D Q V F H P L S S Q S D I F E M V S P L I Q S A L D G Y N I C I F A Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B
B
S T T
S
T T T
S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q T G S G K T Y T M D G V P E S V G V I P R T V D L L F D S I R G Y R N L G W E Y E I K A T F L E I Y N E V L Y D L L S N E Q K D M E I R M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S S T B
S S S B
G G G T S S S
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A K N N K N D I Y V S N I T E E T V L D P N H L R H L M H T A K M N R A T A S T A G N E R S S R S H A V T K L E L I G R H A E K Q E I S V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S T T T
S S S T T T S G G G S T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence S I N L V D L A G S E S P I N R S L S E L T N V I L A L L Q K Q D H I P Y R N S K L T H L L M P S L G G N S K T L M F I N V S P F Q D C F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S
G G G S G G G S S S S
B

. . . . . . . . . 360 . . . .

Sequence E S V K S L R F A A S V N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	S	T	E	V	V	H	L	R	Q	R	T	E	E	L	L	R	C	N	E	Q	Q	A	A	E	L	E	T	C	K	E	Q	L	F	Q	S	N	M	E	R	K	E	L	H	N	T	V	M	D	L	R	G	N	I	R	V	F	C	R	I	R	P	P	L	E	S	E	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																						S												T	T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	M	C	C	T	W	T	Y	H	D	E	S	T	V	E	L	Q	S	I	D	A	Q	A	K	S	K	M	G	Q	Q	I	F	S	F	D	Q	V	F	H	P	L	S	S	Q	S	D	I	F	E	M	V	S	P	L	I	Q	S	A	L	D	G	Y	N	I	C	I	F	A	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B				B			S	T	T							S						T	T	T								S					T	T																			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	T	G	S	G	K	T	Y	T	M	D	G	V	P	E	S	V	G	V	I	P	R	T	V	D	L	L	F	D	S	I	R	G	Y	R	N	L	G	W	E	Y	E	I	K	A	T	F	L	E	I	Y	N	E	V	L	Y	D	L	L	S	N	E	Q	K	D	M	E	I	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S	S						T	B		S	S	S	B																		G	G	G	T													S	S	S					T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	K	N	N	K	N	D	I	Y	V	S	N	I	T	E	E	T	V	L	D	P	N	H	L	R	H	L	M	H	T	A	K	M	N	R	A	T	A	S	T	A	G	N	E	R	S	S	R	S	H	A	V	T	K	L	E	L	I	G	R	H	A	E	K	Q	E	I	S	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								T	T								S														T	T	T			S	S	S	T	T	T	S	G	G	G	S													T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	I	N	L	V	D	L	A	G	S	E	S	P	I	N	R	S	L	S	E	L	T	N	V	I	L	A	L	L	Q	K	Q	D	H	I	P	Y	R	N	S	K	L	T	H	L	L	M	P	S	L	G	G	N	S	K	T	L	M	F	I	N	V	S	P	F	Q	D	C	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																			T	T		S				G	G	G	S							G	G	G	S	S	S	S												B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Sequence	E	S	V	K	S	L	R	F	A	A	S	V	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T