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Job Description | P29355 | Confidence | 50.82% | Date | Sat Apr 13 13:04:03 BST 2013 |
Rank | 317 | Aligned Residues | 81 |
% Identity | 16% | Template | c3gxxB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcription elongation factor spt6; |
PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
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Resolution | 2.40 Å |
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56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | E | C | N | W | Y | L | G | K | I | T | R | N | D | A | E | V | L | L | K | K | P | T | V | R | D | G | H | F | L | V | R | Q | C | E | S | S | P | G | E | F | S | I | S | V | R | F | Q | D | S | V | . |
Q | H | F | K | V | L | R | D | Q | N | G | K | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | N | H | P | Y | Y | F | . |
P | F | N | G | K | Q | A | E | D | Y | L | R | S | K | . |
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E | R | G | D | F | V | I | R | Q | S | S | R | G | D | D | H | L | A | I | T | W | K | L | D | K | D | L | F | Q | H | V | D | I | Q | E | X | E | K | E | X | G | K | V | L | V | V | E | G | Q | R | Y | H | D | L | D | Q |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
8 | . | 10 | . | . | . | . | |
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. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
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132 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | V | A | Y | H | R | T | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | I | V | E | Y | L | Q | N |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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89 | 90 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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