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Job DescriptionP29355
Confidence97.50%DateSat Apr 13 13:04:03 BST 2013
Rank228Aligned Residues113
% Identity23%Templatec3h41A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.. .......50.........60.........70.........80.........90..
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Query Sequence  GNTLKVLNKDEDPHWYKAELD. . . . . . . . . GNEGFIPSNYIRMTECNWYLGKITRNDAEVLLKKPTVRDGHFLVRQCESS
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Template Sequence  GQEVTVVDKKGD. . WVKVLVHGQPTPRNEEGYPGWXPEKQLTYNQEFADKT. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
TT..TT

BTTBSS
GGG

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   8990.........100 .........110.........120.........130.......
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  PGEFSISVRFQDSVQHFKVLRDQNGKYYLWAVKFNSLNELVAYHRTASVSRTHTILLSDMNVETKFVQALFDFNPQESGE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NEPFVLVTKPTAILYINPSEKHKS
Template Known Secondary structure  ........................................................TS

SSSS
TT

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   138.140.........150.........160.
 
   173......180.........190...... ...200.........210.........220..
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Query Sequence  LAFKRGDVITLINKDDPNWWEGQL. NNRRGIFPSNYVCPYNSNKSNSNVAP
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Template Sequence  LEVSYNTRLPLLSEDT. ISYRVLLPNGQKAWLRKNDGTFYRSQNDIPTPAA
Template Known Secondary structure  TT

S.S
TTS
GGGS
GGGS



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   162.......170....... ..180.........190.........200.........210.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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