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Job DescriptionP29355
Confidence99.80%DateSat Apr 13 13:04:03 BST 2013
Rank21Aligned Residues142
% Identity25%Templatec2dybA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox)
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  AVAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTECNWYLGKITRNDAEVLLKKPTVRDG
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Template Sequence  AEALFDFTGNSKLELNFKAGDVIFLLSRI. NKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIK
Template Known Secondary structure  SS
B

SSSSB

B
TT

.SSSTTGGG



TT



SS
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   175....180.........190.........200... ......210.........220.........230.........240.........250...
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  HFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQNGKYYLWAVKFNSLNELVAYHRTASVSRTHTILLSDMNVETKFVQAL
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Template Sequence  DIAVEEDLSSTPLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KDLLELT
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S
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   254.....260....... ..270....
 
   163......170...... ...180.........190..... ....200....
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Query Sequence  FDFNPQESGELAFK. . RGDVITLINKDDPNWWEGQ. . . LNNRRGIFP
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Template Sequence  RREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFP
Template Known Secondary structure  T
S

SSS


STTS

BTTB
S
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   275....280.........290.........300.........310.........320.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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