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Job DescriptionP29355
Confidence94.81%DateSat Apr 13 13:04:03 BST 2013
Rank242Aligned Residues143
% Identity24%Templatec3ps5A_
PDB info PDB header:hydrolase, signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 6; PDBTitle: crystal structure of the full-length human protein tyrosine2 phosphatase shp-1
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.... .....50......
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Query Sequence  AVAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGN. . . . . . . . . . . . . . . . . . . . . . . . . . EGFIPSNYIRMT
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Template Sequence  FLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT
Template Known Secondary structure 
SSSTTSTT
SS
SSSS

BSSTTSS

B
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B




B




S
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   57..60.........70.........80.........90.........100.... .....110.........120.......
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Query Sequence  ECNWYLGKITRNDAEVLLKKPTVRDGHFLVRQCESSPGEFSISVRFQD. . . . . . . . . SVQHFKVLRDQNGKYYLWAVKFN
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Template Sequence  SERWYHGHMSGGQAETLLQAKG. EPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFD
Template Known Secondary structure 
STTS


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TT
SSSTT
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B
GGG
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   107..110.........120........ .130.........140.........150.........160.........170.........180.....
 
   128.130.........140......
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Query Sequence  SLNELVAYHRTASVSRTHT
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Template Sequence  SLTDLVEHFKKTGIEEASG
Template Known Secondary structure  SS
B

TTS
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   186...190.........200....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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