Return to main results Retrieve Phyre Job Id

Job DescriptionP29355
Confidence99.85%DateSat Apr 13 13:04:03 BST 2013
Rank14Aligned Residues154
% Identity37%Templatec2fo0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase abl1 (1b isoform); PDBTitle: organization of the sh3-sh2 unit in active and inactive forms of the2 c-abl tyrosine kinase
Resolution2.27 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50....... ..60.........70........
Predicted Secondary structure 































....




















Query SS confidence 






















































. . . .




















Query Sequence  AVAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTE. . . . CNWYLGKITRNDAEVLLKKPT
Query Conservation   



 
      


   

 
 
     
 

  
   
  
 

  

    ....                     
Alig confidence 






















































....


















..
Template Conservation   

          

    

   

       
         
 

 


     
    

 
 
 
  

 

  ..
Template Sequence  FVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSS. .
Template Known Secondary structure  SS
B


STTB

B
TT

TTSSTTGGGTTSGGGSTT

TSS..
Template Predicted Secondary structure 












































..
Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160..
 
   7980.........90.........100.........110.........120.... .....130.........140.........150.......
Predicted Secondary structure 





















.
































Query SS confidence 













































.
































Query Sequence  VRDGHFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQNGKYYLWAV. KFNSLNELVAYHRTASVSRTHTILLSDMNVETK
Query Conservation              
              
                  .                                 
Alig confidence 













































.
































Template Conservation     
 



 
    
 
 


     
 
  
     
         
 

  

  
     

   
  
       
Template Sequence  GINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKP
Template Known Secondary structure  S
TT
SSSTT
TT
TTS
SSTT

BSS

TTSSS









Template Predicted Secondary structure 











































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   158
Predicted Secondary structure 
Query SS confidence 
Query Sequence  F
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  T
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   243
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D