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Job DescriptionP29355
Confidence100.00%DateSat Apr 13 13:04:03 BST 2013
Rank5Aligned Residues139
% Identity22%Templatec1ng2A_
PDB info PDB header:oxidoreductase activatorChain: A: PDB Molecule:neutrophil cytosolic factor 1; PDBTitle: structure of autoinhibited p47phox
Resolution1.70 Å
Model Dimensions (Å)X:51.892 Y:67.732 Z:34.874

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  EAVAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAELDGNEGFIPSNYIRMTECNWYLGKITRNDAEVLLKKPTVRD
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Template Sequence  TYRAIADYEKTSGSEMALSTGDVVEVVEKS. ESGWWFCQMKAKRGWIPASFLEPLD. . . . . . . . . . . . . . . . . . . . . . . .
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SSTT


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   160.........170.........180......... 190.........200.........210....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  GHFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQNGKYYLWAVKFNSLNELVAYHRTASVSRTHTILLSDMNVETKFVQA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SPDETEDPEPNYAGEPYVA
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   215....220.........230...
 
   162.......170.........180.........190.........200.........210.........220......
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Query Sequence  LFDFNPQESGELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVCPYNSNKSNSNVAPGFNF
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Template Sequence  IKAYTAVEGDEVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQKSGQDVSQAQRQIKRGA
Template Known Secondary structure  SS
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STTB

B
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TTSTTGGGTTS
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   234.....240.........250.........260.........270.........280.........290........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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