Return to main results Retrieve Phyre Job Id

Job DescriptionP29355
Confidence83.32%DateSat Apr 13 13:04:03 BST 2013
Rank293Aligned Residues85
% Identity32%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
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Query Sequence  RMTECNWYLGKITRNDAEVLLKKPTVRDGHFLVRQCESSPGEFSISVRFQDSVQHFKVLRDQNGKYYLWAVKFNSLNELV
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Template Sequence  DLSVHLWYAGPMERAGAESILANRS. . DGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELV
Template Known Secondary structure 
STTSSSS

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   665....670.........680......... 690.........700.........710.........720.........730.........740..
 
   134.....140
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Query Sequence  AYHRTAS
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Template Sequence  EFYQQNS
Template Known Secondary structure  TTS
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   743......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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