|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | A | V | A | E | H | D | F | Q | A | G | S | P | D | E | L | S | F | K | R | G | N | T | L | K | V | L | N | K | D | E | D | P | H | W | Y | K | A | E | L | . |
D | G | N | E | G | F | I | P | S | N | Y | I | R | M | T | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | N | W | Y | L | G | K | I | T | R | N | D |
Query Conservation |   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |
|
|   |   |
|   |   | . |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |
Template Sequence |   |
T | E | C | I | A | K | Y | N | F | H | G | T | A | E | Q | D | L | P | F | C | K | G | D | V | L | T | I | V | A | V | T | K | D | P | N | W | Y | K | A | K | N | K | V | G | R | E | G | I | I | P | A | N | Y | V | Q | K | R | E | G | V | K | A | G | T | K | L | S | L | M | P | W | F | H | G | K | I | T | R | E | Q |
Template Known Secondary structure |   |
|  |  |  |  | S | S |
| B |
|
| S | S | T | T | B |
|
| B |
| T | T |
|  |  |  |  |  |  |  |
| S | S | T | T |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | G | G | G |  |  |  |
|
|
|
|
|
| S | S | S |  |  | S |
| T | T | B |
|
| S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | V | L | L | K | K | P | T | V | R | D | G | H | F | L | V | R | Q | C | E | S | S | P | G | E | F | S | I | S | V | R | F | Q | D | S | V | Q | H | F | K | V | L | R | D | Q | N | G | K | Y | Y | L | W | A | V | K | F | N | S | L | N | E | L | V | A | Y | H | R | T | A | S | V | S | R | T | H | T | I | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   | . | . |   |   |
|   |
|
|
|
|   |
|   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |
Template Sequence |   |
A | E | R | L | L | Y | P | P | . |
. |
E | T | G | L | F | L | V | R | E | S | T | N | Y | P | G | D | Y | T | L | C | V | S | C | E | G | K | V | E | H | Y | R | I | M | Y | H | A | S | K | L | S | I | D | E | E | V | Y | F | E | N | L | M | Q | L | V | E | H | Y | T | T | D | A | D | G | L | C | T | R | L | I | K |
Template Known Secondary structure |   |
 |  |  |  | T |
| S |
| . | . |
| T | T |
|  |  |  |  |  |
| S | S | S | T | T |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  | S | S | S | S | S |
| B | S | S |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S | S | S |
|
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | . | |
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
. | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | D | M | N | V | E | T | K | F | V | Q | A | L | F | D | F | N | P | Q | E | S | G | E | L | A | F | K | R | G | D | V | I | T | L | I | N | K | D | D | P | N | W | . |
W | E | G | Q | L | N | N | R | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |
|
| . |
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | K | V | M | E | G | T | V | . |
. |
. |
A | A | Q | D | E | F | Y | R | S | G | W | A | L | N | M | K | E | L | K | L | L | Q | T | I | G | K | G | E | F | G | D | V | M | L | G | D | Y | R | G | N | K |
Template Known Secondary structure |   |
B |
|
|
| S | S |
|  | . | . | . |  |  |  |  |  |  |  |  | T | T |
| B |
|
| G | G | G |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
170 | . | . | . | . | . | . | . | |
|
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
  |