Return to main results Retrieve Phyre Job Id

Job DescriptionP29355
Confidence94.99%DateSat Apr 13 13:04:03 BST 2013
Rank239Aligned Residues137
% Identity28%Templatec2b3oA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30......... 40........ .50......
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Query Sequence  AVAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKA. . . . . . . . . . . . . . . . . . . . . . ELDGNEGFI. . . . PSNYIRMT
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Template Sequence  FLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPT
Template Known Secondary structure 
SSSSSTT
SSS
TTS
S
TT
S
B

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B







GG
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   57..60.........70.........80.........90.........100..... ....110.........120.........130.
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Query Sequence  ECNWYLGKITRNDAEVLLKKPTVRDGHFLVRQCESSPGEFSISVRFQDS. . . . . VQHFKVLRDQNGKYYLWAVKFNSLNE
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Template Sequence  SERWYHGHMSGGQAETLLQAKG. EPWTFLVRESLSQPGDFVLSVLSDQPKSPLRVTHIKVMCEGGRYTVGGLETFDSLTD
Template Known Secondary structure  G
TTB
TT


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TT
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B

TTSBBSSSS

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   107..110.........120........ .130.........140.........150.........160.........170.........180.....
 
   132.......140
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Query Sequence  LVAYHRTAS
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Template Sequence  LVEHFKKTG
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   190........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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