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Job DescriptionP29355
Confidence97.48%DateSat Apr 13 13:04:03 BST 2013
Rank229Aligned Residues106
% Identity18%Templatec3npfB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative dipeptidyl-peptidase vi; PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40. ........50.........60.........70.........80.........90.......
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Query Sequence  FKRGNTLKVLNKDEDPHWYKAEL. DGNEGFIPSNYIRMTECNWYLGKITRNDAEVLLKKPTVRDGHFLVRQCESSPGEFS
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Template Sequence  ALLGXPVKVLQY. . . NGWYEIQTPDDYTGWVHRXVITPXSKERYDEWNRA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
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   57..60........ .70.........80.........90.........100...
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  ISVRFQDSVQHFKVLRDQNGKYYLWAVKFNSLNELVAYHRTASVSRTHTILLSDMNVETKFVQALFDFNPQESGELAFKR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EKIVVTSHYGFAYEKPDESSQPVSDVVA
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SSSSSSTTS
T
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   104.....110.........120.........130.
 
   178.180.........190...... ...200.........210
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Query Sequence  GDVITLINKDDPNWWEGQL. NNRRGIFPSNYVCP
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Template Sequence  GNRLKWEGSKG. HFYQVSYPDGRKAYLSKSISQP
Template Known Secondary structure  T
T.T
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   132.......140.. .......150.........160....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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