Return to main results Retrieve Phyre Job Id

Job DescriptionP29355
Confidence99.78%DateSat Apr 13 13:04:03 BST 2013
Rank26Aligned Residues150
% Identity34%Templatec1x27F_
PDB info PDB header:signaling proteinChain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50........ .60.........70.....
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Query Sequence  EAVAEHDFQAGSPDELSFKRGNTLKVLNKDEDPHWYKAEL. . DGNEGFIPSNYIRMTEC. . . . NWYLGKITRNDAEVLLK
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Template Sequence  LVIALHSYEPSHDGDLGFEKGEQLRILEQSGE. . WWKAQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLL
Template Known Secondary structure  SS
B


STTB

B
TT



BTT..SSS

GGG
S
STTSTTB
SS

T
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   65....70.........80.........90...... ...100.........110.........120.........130.........140..
 
   76...80.........90.........100....... ..110.........120. ........130.........140.........
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Query Sequence  KPTVRDGHFLVRQCESSPGEFSISVRFQDSVQ. . . . . HFKVLRDQNGKYYL. WAVKFNSLNELVAYHRTASVSRTHTILL
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Template Sequence  APGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSR
Template Known Secondary structure  SSS

TT
SSSTT

SSS

TTS
SSTT

BSS

SSSSS


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   143......150.........160.........170.........180.........190.........200.........210.........220..
 
   150...
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Query Sequence  SDMN
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Template Sequence  PCQT
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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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