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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank272Aligned Residues248
% Identity20%Templatec4f9bC_
PDB info PDB header:transferase/transferase inhibitorChain: C: PDB Molecule:cell division cycle 7-related protein kinase; PDBTitle: human cdc7 kinase in complex with dbf4 and pha767491
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.... .....160.........170.........180......... 190.........200........
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Query Sequence  HENVIFIKKLGEGAFGEVSLAECE. IGGRKVETAVKTMRCQMTRDTRAAFMKEARLMRKY. SHPHIVRIIGKIIVKHLPK
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Template Sequence  SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH. . . PIRIAAELQCLTVAGGQDNVMGVKYCFRKND. . .
Template Known Secondary structure  GGT
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   55....60.........70.........80.........90....... ..100.........110.........120........
 
   209210.........220.........230.........240.........250.........260.........270.........280 .......
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Query Sequence  VGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSIT. DQIKISD
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Template Sequence  . . . . . . . . HVVIAMPYLEHESFLDIL. . . . NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVD
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SGGGTTTT

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   129130.........140...... ...150.........160.........170.........180.........190......
 
   288.290.. .......300.........310.........320 .........330.........340.........350.........
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Query Sequence  FGLSD. . . . . . . DKRTEMHDDTLDKVPVKWLAPEVMQDKL. YSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFC
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Template Sequence  FGLAQGTHDTKIELLKFVQSEAQRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS. GRYPFYKASDDLTALAQIM
Template Known Secondary structure  GGG

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   197..200.........210.........220.........230.........240.........250...... ...260.........270.....
 
   360 .........370.........380.........390........
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Query Sequence  D. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DYRMTFPETTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  TIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGWNEVPDEAYDL. LDKLLDLNPASRITAEEALL
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   429430.........440.........450.........460.........470........ .480.........490........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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