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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank158Aligned Residues271
% Identity19%Templatec4dc2A_
PDB info PDB header:transferase/transferase substrateChain: A: PDB Molecule:protein kinase c iota type; PDBTitle: structure of pkc in complex with a substrate peptide from par-3
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180......... 190.........200.......
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Query Sequence  ISHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTRDTRAAFMKEARLMRKY. SHPHIVRIIGKIIVKHLP
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTD. . RIYAMRVVKKELV. . NIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR.
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GGG
SSTTTT..GGGT..


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   239240.........250.........260....... ..270.........280 .........290.........300.........310...
 
   208.210.........220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  KVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSITDQIKISD
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Template Sequence  . . . . . . . . . . LFFVIEYVNGGDLMFHMQRQR. KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTD
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   318.320.........330........ .340.........350.........360.........370.........380......
 
   288.290.........300.........310.........320.........330.........340.........350......... 360......
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Query Sequence  FGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFC. DDYRMTF
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Template Sequence  YGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDIVGSNTEDYLFQVILEKQIRI
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   387..390.........400.........410.........420.........430........ .440.........450.........460.....
 
   367..370.........380.........390. ....... .400.........410.......
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Query Sequence  PETTPPTISEIALKQCWAKLPSDRA. . . . . . TMKTVHH. . . . . . . KLKDLSMPMSDVSFSMKMK
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Template Sequence  PRSLSVKAASV. LKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNIS
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TTS
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   472.......480.. .......490.........500.........510.........520.........530....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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