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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank293Aligned Residues255
% Identity18%Templatec3ttjA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:mitogen-activated protein kinase 10; PDBTitle: crystal structure of jnk3 complexed with cc-359, a jnk inhibitor for2 the prevention of ischemia-reperfusion injury
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140.........150.........160.........170 .........180.........190........
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Query Sequence  YPIGKADWIISHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQ. MTRDTRAAFMKEARLMRKYSHPHIVRII
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Template Sequence  YSVEVSTFTVL. KRYQNLKPIGSGAQGIVCAAYDAVLD. . RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL
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   4950......... 60.........70.........80..... ....90.........100.........110.........120.....
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  GKIIVKHLPKVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLS
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Template Sequence  NVFTPQKTLE. . . . . EFQDVYLVMELMDANLCQVIQMEL. . . . DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK
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   128.130....... ..140.........150.........160. ........170.........180.........190........
 
   279280.........290.........300.........310.........320.........330.........340.........350........
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Query Sequence  ITDQIKISDFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIF
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Template Sequence  SDCTLKILDFGLASFMMVTRY. . . . . . . . . . YRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILFPGRDYIDQWNKVI
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   199200.........210......... 220.........230.........240......... 250.........260.......
 
   359 360.........370.........380.........390........
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Query Sequence  C. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DDYRMTFPETTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL. LSKMLVIDPAKRISVDDALQ
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   277..280.........290.........300.........310.........320.........330..... ....340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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