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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank49Aligned Residues250
% Identity21%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170... ......180.........190.........200.........
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Query Sequence  HENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTR. DTRAAFMKEARLMRKYSHPHIVRIIGKIIVKHLPKV
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVLAG. . . . QEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGH. . .
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TTTT....S
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BTTB


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   10.........20.........30.... .....40.........50.........60.........70.........80..
 
   210.........220.........230.........240.........250.........260.........270.........280.. ....
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Query Sequence  GLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSITDQ. . . IKIS
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Template Sequence  . . . . . . . . HYLIFDLVTGGELFEDIVARE. YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLA
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B

B
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SSTTSBSSTT


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   85....90.........100..... ....110.........120.........130.........140.........150.....
 
   287..290.........300.........310.........320.........330.........340.........350.........360......
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Query Sequence  DFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFCDDYRMTF
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Template Sequence  DFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPS
Template Known Secondary structure 

SS
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GGG

TT

B
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   156...160.........170.........180.........190.........200........ .210.........220.........230....
 
   367 ..370.........380.........390........
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Query Sequence  P. . ETTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  PEWDTVTPEAKDL. INKMLTINPSKRITAAEALK
Template Known Secondary structure  TTTTTS
.S
SSTTTS

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   235....240....... ..250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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