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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank188Aligned Residues254
% Identity20%Templatec3rp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase; PDBTitle: crystal structure of the apo mapk from toxoplasma gondii, 25.m01780 or2 tgme49_007820
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160....... ..170.........180.........190.........200.
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Query Sequence  GKADWIISHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTM. RCQMTRDTRAAFMKEARLMRKYSHPHIVRIIGKI
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Template Sequence  PHSDWQI. PDRYEIRHLHVCEAYDKLRV. . . . . . . . . . . VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIV
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   45....50. ........60.........70. ........80.........90.........100.........110..
 
   202.......210.........220.........230.........240.........250.........260.........270.........280.
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Query Sequence  IVKHLPKVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSITD
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Template Sequence  IPKDVE. . . . . . KFDELYVVLEIADSDFKK. . LFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC
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   122..... ..130.........140..... ....150.........160.........170.........180.........190...
 
   282.......290.........300.........310.........320 .........330.........340.........350
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Query Sequence  QIKISDFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKL. YSLKSDVWAFGVLMWEIYADGADPYPGMTN. . . . . . . . . .
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Template Sequence  SVKVCDFGLARTVDYPENGNSQLPVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN. MIKENVAYHADRGPLFPTRG
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   194.....200.........210.........220.........230.........240.........250.. .......260.........270..
 
   351........360........ .370.........380.........390........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . LVTRAKIFCDDYRMTFPE. . . . . . TTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  NRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHL. LKRMLVFNPNKRITINECLA
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   320.........330.........340.........350.........360.........370...... ...380.........390......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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