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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank48Aligned Residues252
% Identity25%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130........ .140.........150.........160.........170.........180.........190.........200
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Query Sequence  ADWIISHENVIFIK. . . . KLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTRDTRAAFMKEARLMRKYSHPHIVRIIGK
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Template Sequence  PGMYVRKKEGKIGESYFKVRKLGSYGEVLLCKEKNGHS. . EKAIKVIKKKF. . . . HEEIYNEISLLKSLDHPNIIKLFDV
Template Known Secondary structure  GGGG


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   42.......50.........60.........70......... 80.........90 .........100.........110.....
 
   201........210.........220.........230.........240.........250.........260.........270.......
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Query Sequence  IIVKHLPKVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLL. . .
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Template Sequence  FEDKK. . . . . . . . . . . YFYLVTEFYEGGELFEQIINRHK. FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK
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   134.... .140.........150.........160. ........170.........180.........190.........200.
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
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Query Sequence  SITDQIKISDFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKI
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Template Sequence  NSLLNIKIVDFGLSSFF. SKDYKLRDRLGTAYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKV
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   202.......210........ .220.........230.........240. ........250.........260. ........270........
 
   358.360....... ..370.........380.........390........
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Query Sequence  FCDDYRMTFP. . ETTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  EKGKYYFDFNDWKNISDEAKEL. IKLMLTYDYNKRCTAEEALN
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   279280.........290.........300 .........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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