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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank24Aligned Residues280
% Identity24%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170. ........180......... 190.....
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Query Sequence  KYPIGKADWIISHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQM. . TRDTRAAFMKEARLMRKY. SHPHIV
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Template Sequence  EEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDE. . LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT
Template Known Secondary structure  TGGGT





TTSSBTTTB
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   281........290.........300.........310.........320 .........330.........340.........350........
 
   196...200.........210.........220.........230.........240.........250.........260.........270.....
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Query Sequence  RIIGKIIVKHLPKVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNC
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Template Sequence  QLHSCFQTMD. . . . . . . . . . . RLYFVMEYVNGGDLMYHIQQVG. RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNV
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   405....410.... .....420.........430...... ...440.........450.........460.........470..
 
   276...280.........290.........300.........310.........320.........330.........340.........350.....
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Query Sequence  LLSITDQIKISDFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRA
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Template Sequence  MLDSEGHIKIADFGMCKEN. IWDGVTTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQ
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   473......480.........490. ........500.........510.........520.........530..... ....540.........550
 
   356...360.........370.........380.........390... ..... .400.........410.......
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Query Sequence  KIFCDDYRMTFPETTPPTISEIALKQCWAKLPSDRATM. . . . . KTVHH. . . . . . . KLKDLSMPMSDVSFSMKMK
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Template Sequence  SIMEHN. . VAYPKSMSKEAVAI. CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKAS
Template Known Secondary structure  SS
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TTS
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   552..... ..560.........570. ........580.........590.........600.........610.........620..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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