Job Description Q19726 Confidence 99.53% Date Sat Apr 13 13:19:58 BST 2013 Rank 409 Aligned Residues 78 % Identity 18% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																					.	.																								.															.	.	.	.	.	.	.
Query SS confidence																					.	.																								.															.	.	.	.	.	.	.
Query Sequence		N	N	E	W	F	H	G	V	L	Q	R	Q	D	A	D	E	L	L	V	.	.	K	P	G	S	F	L	L	R	A	S	E	V	H	G	K	M	S	M	I	L	S	V	R	.	H	D	G	K	L	H	N	I	A	V	N	S	D	T	.	.	.	.	.	.	.	G	E	N	F	W	F	E	G	H	R	E	K	S	I
Query Conservation																					.	.																								.															.	.	.	.	.	.	.
Alig confidence								.													.	.											.													.															.	.	.	.	.	.	.
Template Conservation								.																									.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	.	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L
Template Known Secondary structure				T	T			.												T	T	S		T	T								.	S	S		T	T										T	T											S		S	S	T	T	S			S					T	T				S	S
Template Predicted Secondary structure								.																									.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		97	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	L	V	Q	W	H	M	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y	L	Q	N
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D