Job Description Q19726 Confidence 100.00% Date Sat Apr 13 13:19:58 BST 2013 Rank 200 Aligned Residues 271 % Identity 17% Template c3op5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: human vaccinia-related kinase 1 Resolution 2.40 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																	.	.																		.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.																		.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	S	H	E	N	V	I	F	I	K	K	L	G	E	.	.	G	A	F	G	E	V	S	L	A	E	C	E	I	G	G	R	K	.	.	.	V	E	T	A	V	K	T	M	R	C	Q	M	T	R	D	T	R	A	.	.	.	.	.	.	.	.	.	.	A	F	M	K	E	A	R	L	M	R	K	Y	S	H	P
Query Conservation																	.	.																		.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																		.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	I	T	D	M	A	A	A	A	W	K	V	G	L	P	I	G	Q	F	G	C	I	Y	L	A	D	M	N	S	S	E	S	V	G	S	D	A	P	C	V	V	K	V	E	P	S	D	N	G	P	L	F	T	E	L	K	F	Y	Q	R	A	A	K	P	E	Q	I	Q	K	W	I	R	T	R	K	L	K	Y	L
Template Known Secondary structure							T	T											.													S	S				T	T		S								T	T																											T	T		S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	V	R	I	I	G	K	I	I	V	K	H	L	P	K	V	G	L	A	V	D	A	H	P	L	M	I	V	M	E	M	C	P	H	G	S	L	L	S	F	L	R	K	N	K	G	K	T	T	L	S	E	R	L	R	F	C	I	E	S	A	D	G	L	A	Y	L	E	K	K	Q	C	L	H	R	D	I	A	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.										.
Template Conservation																			.	.	.	.	.	.	.										.
Template Sequence		G	V	P	K	Y	W	G	S	G	L	H	D	K	N	G	K	S	.	.	.	.	.	.	.	Y	R	F	M	I	M	D	R	F	.	G	S	D	L	Q	K	I	Y	E	A	N	A	K	R	F	S	R	K	T	V	L	Q	L	S	L	R	I	L	D	I	L	E	Y	I	H	E	H	E	Y	V	H	G	D	I	K	A
Template Known Secondary structure			S												T	T			.	.	.	.	.	.	.										.											T	T	S																								T	T								G
Template Predicted Secondary structure																			.	.	.	.	.	.	.										.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		273	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure									.	.																		.	.	.	.	.	.	.
Query SS confidence									.	.																		.	.	.	.	.	.	.
Query Sequence		R	N	C	L	L	S	I	.	.	T	D	Q	I	K	I	S	D	F	G	L	S	D	D	K	R	T	.	.	.	.	.	.	.	E	M	H	D	D	T	L	D	K	V	P	V	K	W	L	A	P	E	V	M	Q	D	K	L	Y	S	L	K	S	D	V	W	A	F	G	V	L	M	W	E	I	Y	A	D	G	A	D
Query Conservation									.	.																		.	.	.	.	.	.	.
Alig confidence									.	.																		.	.	.	.	.	.	.																																												.
Template Conservation																																																																														.
Template Sequence		S	N	L	L	L	N	Y	K	N	P	D	Q	V	Y	L	V	D	Y	G	L	A	Y	R	Y	C	P	E	G	V	H	K	A	Y	A	A	D	P	K	R	C	H	D	G	T	I	E	F	T	S	I	D	A	H	N	G	V	A	P	S	R	R	G	D	L	E	I	L	G	Y	C	M	I	Q	W	L	T	.	G	H	L
Template Known Secondary structure		G	G					S	S		T	T								T	T				S	S	G	G	G					S	S			S	S							T	T	T							T	T																						.	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.										.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	P	G	M	T	N	L	V	T	R	A	K	I	F	C	D	D	Y	R	.	.	.	.	.	.	.	.	.	M	T	F	P	E	T	T	P	P	T	I	S	E	I	A	L	K	Q	C	W	A	K	L	P	S	D	R	A	T	M	K	T	V	H	H	K	L	K	D	L	S	M	P	M	S
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.															.
Template Conservation																																													.
Template Sequence		P	W	E	D	N	L	K	D	P	K	Y	V	R	D	S	K	I	R	Y	R	E	N	I	A	S	L	M	D	K	C	F	P	A	A	N	A	P	G	E	I	A	K	Y	.	M	E	T	V	K	L	L	D	Y	T	E	K	P	L	Y	E	N	L	R	D	I	L	L	Q	G	L	K	A	I	G
Template Known Secondary structure		T	T	G	G	G	T	T																								S		T	T										.						T			T	T																			T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D