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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank143Aligned Residues261
% Identity28%Templatec3kexA_
PDB info PDB header:transferaseChain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-3; PDBTitle: crystal structure of the catalytically inactive kinase2 domain of the human epidermal growth factor receptor 33 (her3)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150......... 160.........170.........180.........190.........200.....
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Query Sequence  IISHENVIFIKKLGEGAFGEVSLAECEIGGRK. . VETAVKTMRCQMTRDTRAAFMKEARLMRKYSHPHIVRIIGKIIVKH
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Template Sequence  IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS
Template Known Secondary structure  B

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   684.....690.........700.........710.........720.........730.........740.........750.........760...
 
   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  LPKVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSITDQIKI
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Template Sequence  . . . . . . . . . . . . LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQV
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   764.....770.........780.........790.........800.........810.........820.........830.
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  SDFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFCDDYRMT
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Template Sequence  ADFGVADLLPPDDKQLLTPIK. . . WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL. EKGERLA
Template Known Secondary structure 
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   832.......840.........850.. .......860.........870.........880.........890.........900 .......
 
   366...370.........380.........390.........400.....
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Query Sequence  FPETTPPTISEIALKQCWAKLPSDRATMKTVHHKLKDLSM
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Template Sequence  QPQICTIDVYMV. MVKCWMIDENIRPTFKELANEFTRMAR
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   913......920.... .....930.........940.........950.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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