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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank184Aligned Residues236
% Identity24%Templatec3i6uA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  ENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTRDTRAAFMKEARLMRKYSHPHIVRIIGKIIVKHLPKVGL
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Template Sequence  DEYIMSKTLGSGACGEVKLAFERKTCK. . KVAIRIISKRKFA. IGLNVETEIEILKKLNHPCIIKIKNFFDAED. . . . . .
Template Known Secondary structure  TT
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..GGGGT.T





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   218.220.........230.........240.... .....250....... ..260.........270.........280........
 
   212.......220.........230.........240.........250.........260.........270........ .280........
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Query Sequence  AVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLS. . . ITDQIKISDF
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Template Sequence  . . . . . . YYIVLELMEGGELF. DKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF
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TT
BGG.GGTSSS



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S
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   297..300.........310 .........320.........330.........340.........350.........360.........
 
   289290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  GLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFCDDYRMTFP.
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Template Sequence  GHSKILGP. . . . . . . . . . . . . TYLAPEVLVAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPE
Template Known Secondary structure  STTTS


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TTTT

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TT




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   370....... ..380.........390.........400....... ..410.........420.........430.....
 
   368.370.........380.........390........
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Query Sequence  . . ETTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  VWAEVSEKALDL. VKKLLVVDPKARFTTEEALR
Template Known Secondary structure  TTS
.S
SSTTTS

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   451........460.. .......470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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