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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank202Aligned Residues280
% Identity16%Templatec3e7eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitotic checkpoint serine/threonine-protein kinase bub1; PDBTitle: structure and substrate recruitment of the human spindle checkpoint2 kinase bub
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  HMTTSTPITKTSGVKLKYPIGKADWIISHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTRDTRAAFMKE
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Template Sequence  KPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQNKQK. . . . FVLKVQKPA. NPWEFYIGTQL
Template Known Secondary structure  S
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   756...760.........770.........780.........790.........800.........810 ......... 820.........830
 
   183......190.........200.........210.........220.........230.... .....240.........250........
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Query Sequence  ARLMRKYSHPHIVRIIGKIIVKHLPKVGLAVDAHPLMIVMEMCPHGSLLSFL. . . . RKNKGKTTLSERLRFCIESADGLA
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Template Sequence  MERLKPSMQHMFMKFYSAHLFQNG. . . . . . . . . . . SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE
Template Known Secondary structure  S
GGGGGGB


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   838.840.........850.........860. ........870.........880.........890.........900......
 
   259260.........270....... ..280.........290.........300..... ....310.........320.........330.
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Query Sequence  YLEKKQCLHRDIAARNCLL. . . . . SITDQIKISDFGLSDDKRTEMHDDTLDK. . VPVKWLAPEVMQDKLYSLKSDVWAFG
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Template Sequence  QVHDCEIIHGDIKPDNFILGNGFLEQSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVA
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SGGG
GGGT


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   907..910.........920.........930.........940.........950.........960.........970.........980......
 
   332.......340.........350.........360.........370.........380.........390 .........400......
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Query Sequence  VLMWEIYADGADPYPGMTNLVTRAKIFCDDYRMTFPETTPPTISEIALKQCWAKLPSDR. ATMKTVHHKLKDLSMP
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Template Sequence  ATVYCMLF. GTYMKVKNEG. . . . . . . GECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ
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   993......1000 .........1010 .........1020.........1030.........1040.........1050.........1060
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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