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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank278Aligned Residues224
% Identity25%Templatec3alnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160.........170... ......180.........190.........200.
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Query Sequence  GKADWIISHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTR. DTRAAFMKEARLMRKYSHPHIVRIIGKI
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Template Sequence  PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQ. . IMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY. . .
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   91........100.........110.........120...... ...130.........140.........150.........160.....
 
   202.......210.........220......... 230.........240.........250.........260... ......270.......
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Query Sequence  IVKHLPKVGLAVDAHPLMIVMEMCPHGS. . . LLSFLRKNKGKTTLSERLRFCIESADGLAYLEKK. QCLHRDIAARNCLL
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Template Sequence  . . . . . . . . GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL
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   166...170.........180.........190.........200.........210.........220.........230.......
 
   278.280.........290.........300.........310.........320.........330.........340.........350.......
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Query Sequence  SITDQIKISDFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKI
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Template Sequence  DRSGNIKLCDFGIS. . . . . . . . . . . . . . . . . . . . . . . . . . GQLYDVRSDVWSLGITLYELAT. GRFPYPDPP. . . . . . . .
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   238.240.........250. ........260.........270... ......280..
 
   358.360.........370.........380.........390........
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Query Sequence  FCDDYRMTFPETTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  . . . QLSNSEEREFSPSFINF. VNLCLTKDESKRPKYKELLK
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   327..330.........340... ......350.........360...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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