Return to main results Retrieve Phyre Job Id

Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank287Aligned Residues259
% Identity20%Templatec2xs0A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:mitogen-activated protein kinase 8; PDBTitle: linear binding motifs for jnk and for calcineurin antagonistically2 control the nuclear shuttling of nfat4
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170 .........180.........190.........200.........210
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Query Sequence  ENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQ. MTRDTRAAFMKEARLMRKYSHPHIVRIIGKIIVKHLPKVG
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Template Sequence  KRYQNLKPIGSGAQGIVCAAYDAILE. . RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF
Template Known Secondary structure  TTTTTTTT..
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   24.....30.........40......... 50.........60.........70.........80.........90.........100.
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  LAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSITDQIKISDFGL
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Template Sequence  QD. . . . . VYIVMELMDAN. . . . LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL
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   102. ......110.... .....120.........130.........140.........150.........160.........170..
 
   291........300.........310.........320.........330.........340.........350.........360
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Query Sequence  SDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFCD. . . . . . . . . .
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Template Sequence  ATRY. . . . . . . . . . . . . . . YRAPEVILGMGYKENVDIWSVGCIMGEMIK. GGVLFPGTDHIDQWNKVIEQLGTPCPEFMK
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   173... ...180.........190.........200...... ...210.........220.........230......
 
   361........370.........380.........390......... 400........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DYRMTFPETTPPTISEIALKQCWAKLPSDRATMKTVHHK. . LKDLSMPMS
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Template Sequence  KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL. LSKMLVIDASKRISVDEALQHPYINVWYDPSE
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   251........260.........270.........280.........290....... ..300.........310.........320.........
 
   409410........
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Query Sequence  DVSFSMKMKR
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Template Sequence  AEAPPPKIPD
Template Known Secondary structure  S





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   330.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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