284 c2vagA_ Probab=100.00  E-value=1.3e-35  Score=224.31  Aligned_columns=261  Identities=18%

Q ss_pred             EECHHHCCEEEEECCCCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
Q ss_conf             11120120000201148837999998069977999999976335989999999999999845998472499888617864
Q batch____       128 IISHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTRDTRAAFMKEARLMRKYSHPHIVRIIGKIIVKHLP  207 (418)
Q Consensus       128 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~VAVK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIV~l~g~~~~~~~~  207 (418)
                      ++-.+++++.++||+|+||+||+|++...++.. ||||+++  ......+.+.+|+.+|++++|+|+++.+..+...   
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~-vAiK~i~--~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~---   82 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRH-VAVKIVK--NVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML---   82 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEE-EEEEEEC--SSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE---
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEE-EEEEEEC--CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE---
T ss_conf             486782599999876288489999997679839-9999983--9905689999999999984312223312220000---


Q ss_pred             EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             02688528806999744433444331111245688889999999999988763311343210061013457667523243
Q batch____       208 KVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSITDQIKISD  287 (418)
Q Consensus       208 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~ih~dl~~~nil~~~~~~~kl~D  287 (418)
                        ........+++.++++..+....................+..++..++.++|...++|+|+++.|++++.++..++.+
T Consensus        83 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~  160 (330)
T c2vagA_          83 --EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN  160 (330)
T ss_dssp             --EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             --CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECC
T ss_conf             --123332000012211236752111222111013656555554455555431101222234554158985788620003


Q ss_pred             CCEEE-----------CCCCCCCCCCCEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf             21011-----------0476621123201101347977994697355531024899999999788999998898999999
Q batch____       288 FGLSD-----------DKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAK  356 (418)
Q Consensus       288 fGls~-----------~~~~~~~~~~~~~~~~~y~APE~l~~~~~s~ksDVwSfGvil~Ei~t~G~~Pf~~~~~~~~~~~  356 (418)
                      |+.+.           .................+.+||......++.++|+|++|+++|++.+ +..|+...+..+.+..
T Consensus       161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~  239 (330)
T c2vagA_         161 KRDERTLINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAM  239 (330)
T ss_dssp             CCEEEEESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHH
T ss_pred             CCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHH
T ss_conf             454334444321000146633267542001210232100000111123542102258731004-8898875896899999


Q ss_pred             HHHCCCCCC------------------------------------------CCCCCCHHHHHHHHHHHCCCCHHHCCCHH
Q ss_conf             994789988------------------------------------------98558999999999986478966769889
Q batch____       357 IFCDDYRMT------------------------------------------FPETTPPTISEIALKQCWAKLPSDRATMK  394 (418)
Q Consensus       357 ~~~~~~~~~------------------------------------------~p~~~p~~l~~l~l~~c~~~dP~~RPs~~  394 (418)
                      +......++                                          .+..+++++.++ |++||+.||++|||++
T Consensus       240 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl-i~~mL~~dP~~R~t~~  318 (330)
T c2vagA_         240 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL-IQKMLEYDPAKRITLR  318 (330)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH-HHHHTCSSTTTSCCHH
T ss_pred             HHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH-HHHHCCCCHHHCCCHH
T ss_conf             985138899889744201212354656653210001110012333100235654589999999-9986658811177678


Q ss_pred             HHHH
Q ss_conf             9999
Q batch____       395 TVHH  398 (418)
Q Consensus       395 ei~~  398 (418)
                      ||++
T Consensus       319 elL~  322 (330)
T c2vagA_         319 EALK  322 (330)
T ss_dssp             HHTT
T ss_pred             HHHC
T ss_conf             9967


