Job Description Q19726 Confidence 100.00% Date Sat Apr 13 13:19:58 BST 2013 Rank 196 Aligned Residues 274 % Identity 18% Template c2v62A_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2 Resolution 1.7 Å

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		131	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.													.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure														.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	E	N	V	I	F	I	K	K	L	G	E	.	.	.	.	G	A	F	G	E	V	S	L	A	E	C	E	I	G	G	R	K	V	E	T	A	V	K	T	M	R	C	Q	M	T	.	.	.	.	.	.	.	.	.	.	.	.	R	D	T	R	A	A	F	M	K	E	A	R	L	M	R	K	Y	S	H	P	H	I
Query Conservation														.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		P	E	G	K	V	L	D	D	M	E	G	N	Q	W	V	L	G	K	K	I	L	I	Y	L	A	F	P	T	N	K	P	E	.	.	K	D	A	R	H	V	V	K	V	E	Y	Q	E	G	P	L	F	S	E	L	K	F	Y	Q	R	V	A	K	K	D	C	I	K	K	W	I	E	R	K	Q	L	D	Y	L	G	I
Template Known Secondary structure			T	T						T	T	S																	S	S	S		G	.	.	G	G																																						T		S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	I	I	G	K	I	I	V	K	H	L	P	K	V	G	L	A	V	D	A	H	P	L	M	I	V	M	E	M	C	P	H	G	S	L	L	S	F	L	R	K	N	K	G	K	T	T	L	S	E	R	L	R	F	C	I	E	S	A	D	G	L	A	Y	L	E	K	K	Q	C	L	H	R	D	I	A	A	R	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.													.												.
Template Conservation														.	.	.	.	.	.	.													.												.
Template Sequence		P	L	F	Y	G	S	G	L	T	E	F	K	.	.	.	.	.	.	.	G	R	S	Y	R	F	M	V	M	E	R	L	.	G	I	D	L	Q	K	I	S	G	Q	N	.	G	T	F	K	K	S	T	V	L	Q	L	G	I	R	M	L	D	V	L	E	Y	I	H	E	N	E	Y	V	H	G	D	I	K	A	A	N
Template Known Secondary structure												S	S	.	.	.	.	.	.	.	S												.									B	G	G	.	G	B																							T	T				S			S	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.													.												.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		275	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.								.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure												.	.																		.	.	.	.	.	.	.
Query SS confidence												.	.																		.	.	.	.	.	.	.
Query Sequence		C	L	L	S	I	T	D	Q	I	K	.	.	I	S	D	F	G	L	S	D	D	K	R	T	E	M	H	D	D	.	.	.	.	.	.	.	T	L	D	K	V	P	V	K	W	L	A	P	E	V	M	Q	D	K	L	Y	S	L	K	S	D	V	W	A	F	G	V	L	M	W	E	I	Y	A	D	G	A	D	P	Y
Query Conservation												.	.																		.	.	.	.	.	.	.
Alig confidence												.	.																		.	.	.	.	.	.	.																																							.
Template Conservation																																																																												.
Template Sequence		L	L	L	G	Y	K	N	P	D	Q	V	Y	L	A	D	Y	G	L	S	Y	R	Y	C	P	N	G	N	H	K	Q	Y	Q	E	N	P	R	K	G	H	N	G	T	I	E	F	T	S	L	D	A	H	K	G	V	A	L	S	R	R	S	D	V	E	I	L	G	Y	C	M	L	R	W	L	C	.	G	K	L	P	W
Template Known Secondary structure						S	S	S	T	T	S							T	T				S	S	G	G	G									G	G	G		S		S		T	T	T								T																						.	S	S		T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250
		346	.	.	.	350										.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.
Query Sequence		P	G	M	T	N	.	.	.	.	.	.	.	.	.	L	V	T	R	A	K	I	F	C	D	D	Y	R	M	T	F	P	E	T	T	P	P	T	I	S	E	I	A	L	K	Q	C	W	A	K	L	P	S	D	R	A	T	M	K	T	V	H	H	K	L	K	D	L	S	M	P	M	S	D	V	S	F	S	M	K	M
Query Conservation							.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																												.
Template Conservation																																											.
Template Sequence		E	Q	N	L	K	D	P	V	A	V	Q	T	A	K	T	N	L	L	D	E	L	P	Q	S	V	L	K	W	A	P	S	G	S	S	C	C	E	I	A	Q	F	.	L	V	C	A	H	S	L	A	Y	D	E	K	P	N	Y	Q	A	L	K	K	I	L	N	P	H	G	I	P	L	G	P	L	D	F	S	T	K	G
Template Known Secondary structure		G	G	G	T	T															T	T	T							S		T	T	S									.						T			T	T														T	T												T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		417
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		330

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D