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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank223Aligned Residues232
% Identity22%Templatec2onlD_
PDB info PDB header:transferaseChain: D: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.... .....150.........160.........170.........180......... 190.........200.........210.
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Query Sequence  VIFIKKLGEGA. FGEVSLAECEIGGRKVETAVKTMRCQMTRDTRAAFMKEARLMRKY. SHPHIVRIIGKIIVKHLPKVGL
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Template Sequence  VKSGLQIKKNAIIDDVLQIFNKRTQE. . KFALKMLQDC. . . . . . PKARREVELHWRASQCPHIVRIVDVYE. . . . . . . NL
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   48.50.........60.........70... ......80... ......90.........100.........110 ..
 
   212.......220.........230.........240 .........250.........260.........270......... 280.......
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Query Sequence  AVDAHPLMIVMEMCPHGSLLSFLRKNKGK. TTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSI. . . TDQIKISD
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Template Sequence  YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  FGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFCDDYRMTFP
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Template Sequence  FGFAKET. TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC. GYPPFYE. . . . . . . . . . . . . . FPNPEW
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   208.210.... .....220.........230.........240.........250........ .260..... ....270.
 
   368.370.........380.........390.......
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Query Sequence  ETTPPTISEIALKQCWAKLPSDRATMKTVH
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Template Sequence  SEVSEEVKML. IRNLLKTEPTQRMTITEFM
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   292.......300. ........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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