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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank170Aligned Residues242
% Identity20%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.... .....180.........190 .........200....
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Query Sequence  ENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTRD. . . . . TRAAFMKEARLMRKYS. . HPHIVRIIGKIIVK
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDN. . LPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP
Template Known Secondary structure  TTTTTT..GGG



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   36...40.........50.........60. ........70.........80.........90.........100.........110...
 
   205....210.........220.........230.........240.........250.........260.........270........ .280...
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Query Sequence  HLPKVGLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLS. ITDQI
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Template Sequence  DS. . . . . . . . . . . FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL
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SGGGTTTT
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   114. ....120.........130.........140.........150.........160.........170.........180..
 
   284.....290.........300.........310.........320 .........330.........340.........350.........360..
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Query Sequence  KISDFGLSDDKRTEMHDDTLDKVPVKWLAPEVMQDKL. YSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFCDDY
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Template Sequence  KLIDFGSGALLKDTVYTDFD. . GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEEII. . . . . . . . GG
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   183......190.........200.. .......210.........220.........230....... ..240......... 250.
 
   363......370.........380.........390........
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Query Sequence  RMTFPETTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  QVFFRQRVSSECQHL. IRWCLALRPSDRPTFEEIQN
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   252.......260...... ...270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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