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Job DescriptionQ19726
Confidence100.00%DateSat Apr 13 13:19:58 BST 2013
Rank43Aligned Residues250
% Identity26%Templatec2c30A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase pak 6; PDBTitle: crystal structure of the human p21-activated kinase 6
Resolution1.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  SHENVIFIKKLGEGAFGEVSLAECEIGGRKVETAVKTMRCQMTRDTRAAFMKEARLMRKYSHPHIVRIIGKIIVKHLPKV
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Template Sequence  PRLLLDSYVKIGEGSTGIVCLAREKHSGR. . QVAVKMMDLRKQQ. RRELLFNEVVIMRDYQHFNVVEMYKSYLVGE. . . .
Template Known Secondary structure  TTTTT

..TTT

.STT


TTB

TT....
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   403......410.........420.........430. ........440.... .....450.........460.........470.....
 
   210.........220.........230.........240.........250.........260.........270.........280.........
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Query Sequence  GLAVDAHPLMIVMEMCPHGSLLSFLRKNKGKTTLSERLRFCIESADGLAYLEKKQCLHRDIAARNCLLSITDQIKISDFG
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Template Sequence  . . . . . . . ELWVLMEFLQGGALTDIVSQVR. . LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFG
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S
BTT

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TT



SGGG
TT




T
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   476...480.........490....... ..500.........510.........520.........530.........540......
 
   290.........300.........310.........320.........330.........340.........350.........360.. ......
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Query Sequence  LSDDKRTEMHDDTLDKVPVKWLAPEVMQDKLYSLKSDVWAFGVLMWEIYADGADPYPGMTNLVTRAKIFCDDY. RMTFPE
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Template Sequence  FCAQISK. DVPKRKLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD. GEPPYFSDSPVQAMKRLRDSPPPKLKNSH
Template Known Secondary structure  T


S.SS

B


S
GGG

TT

B
T.SS
TTTTS
SS



TTGG
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   547..550... ......560.........570.........580.........590..... ....600.........610.........620....
 
   369370.........380.........390........
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Query Sequence  TTPPTISEIALKQCWAKLPSDRATMKTVHH
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Template Sequence  KVSPVLRDF. LERMLVRDPQERATAQELLD
Template Known Secondary structure  GS
.S
SSTTTS

T
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   626...630.... .....640.........650....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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