Return to main results Retrieve Phyre Job Id

Job DescriptionQ19726
Confidence99.83%DateSat Apr 13 13:19:58 BST 2013
Rank334Aligned Residues102
% Identity26%Templatec1x6cA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: solution structures of the sh2 domain of human protein-2 tyrosine phosphatase shp-1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40..... ....50.........60.........70.. .......80.........90
Predicted Secondary structure 














...












.........





Query SS confidence 






















. . .


























. . . . . . . . .

















Query Sequence  GQKQNNEWFHGVLQRQDADELLV. . . KPGSFLLRASEVHGKMSMILSVRHDGK. . . . . . . . . LHNIAVNSDTGENFWFEG
Query Conservation         
  
 
 
  

 

 ...  
 



 
         


     .........  
  
            
Alig confidence 






















...












.












.........

















Template Conservation         



 


 


 

      
 



 
   .   
 


          
     
  
            
Template Sequence  GSSGSSGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQ. PGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGL
Template Known Secondary structure 

S






SS



SS
SSS.TT
SSSTTS
TTSSSS
Template Predicted Secondary structure 






















.














Template SS confidence 















































































   1........10.........20.........30......... 40.........50.........60.........70.........
 
   91........100.........110.........120.....
Predicted Secondary structure 

























Query SS confidence 


































Query Sequence  HREKSIDQLVQWHMTTSTPITKTSGVKLKYPIGKA
Query Conservation    
 

  

  
              
  
    
Alig confidence 


































Template Conservation    
 

  

  
    
    
    
  
    
Template Sequence  ETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYSG
Template Known Secondary structure 

BSS

SSS







Template Predicted Secondary structure 




















Template SS confidence 


































   80.........90.........100.........110....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D