Job Description Q19726 Confidence 99.82% Date Sat Apr 13 13:19:58 BST 2013 Rank 341 Aligned Residues 96 % Identity 20% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.
Predicted Secondary structure																							.	.	.																																												.	.	.	.	.	.
Query SS confidence																							.	.	.																																												.	.	.	.	.	.
Query Sequence		K	Q	N	N	E	W	F	H	G	V	L	Q	R	Q	D	A	D	E	L	L	V	.	.	.	K	P	G	S	F	L	L	R	A	S	E	V	H	G	K	M	S	M	I	L	S	V	R	H	D	G	K	L	H	N	I	A	V	N	S	D	T	G	E	N	F	W	F	.	.	.	.	.	.	E	G	H	R	E	K	S
Query Conservation																							.	.	.																																												.	.	.	.	.	.
Alig confidence																							.	.	.														.																														.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		M	D	A	V	A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	.	P	G	V	Y	C	L	C	V	L	Y	H	G	Y	I	Y	T	Y	R	V	S	Q	T	E	T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	Y	F	R	K
Template Known Secondary structure						S	S	B			S																T	T								S	S	S	.	T	T								S	S	S											T	T	S							S	T	T	S						S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	Q	L	V	Q	W	H	M	T	T	S	T	P	I	T	K	T	S	G	V	K	L	K	Y	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	N	L	I	S	A	F	Q	K	P	D	Q	G	I	V	I	P	L	Q	Y	P	V	E	K	K
Template Known Secondary structure									T	T	S	S		S	S	S	S	S				S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D