311 d1q8ya_ Probab=100.00  E-value=2e-34  Score=201.64  Aligned_columns=252  Identities=19%

Q ss_pred             CCHHHEEEEEECCCCCCEEEEEEEECCCC-EEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE-----------EEEEEEE
Q ss_conf             47545788640254788279999977993-89999988861378999999999986088979-----------9885210
Q batch____       257 IPRNQLHLKRKLGDGNFGEVWYGKWRGIV-EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNL-----------VKLYAVC  324 (533)
Q Consensus       257 i~~~~~~~~~~LG~G~fg~V~~~~~~~~~-~VAvK~~~~~~~~~~~~~~E~~~l~~l~h~ni-----------v~~~g~~  324 (533)
                      +....|++.+.||+|+||+||+|+++.+. .||||+++.+....+++.+|+.+|++|+|+|+           +++++++
T Consensus        10 ~~~~rY~i~~~LG~G~fG~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~E~~il~~l~h~~i~~~~~~~~~~~~~~~~~~   89 (351)
T d1q8ya_          10 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (351)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             EECCCEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEC
T ss_conf             13691799999876388489999998898199999981992348999999999998385556666330235510263201


Q ss_pred             CCCC----EEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCCEEEECCC--CCCCC
Q ss_conf             4598----28999988888858899995488788999999999999798-76220357054676530574578--78667
Q batch____       325 TREE----PFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGM-MYLEERKLVHRDLAARNVLVGDK--ISGVP  397 (533)
Q Consensus       325 ~~~~----~~~iv~E~~~~gsL~~~l~~~~~~l~~~~~~~~~~qia~~l-~~lH~~~~~h~dlk~~Nili~~~--~~~~~  397 (533)
                      ....    ..++++..+...............................+ ..++...++|.++++.|++...+  .....
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~  169 (351)
T d1q8ya_          90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI  169 (351)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             CCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCC
T ss_conf             33466675356530233322100121102455755676777764201233432202675303442013114786432333


Q ss_pred             CCCCCCCCEEEEECCCCCEEEECCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf             63212343045403787324423565786768977994689975789999999999999288899987798999999981
Q batch____       398 VVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVEL  477 (533)
Q Consensus       398 ~~kl~dfgls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~S~Gv~l~El~t~G~~P~~~~~~~~~~~~i~~  477 (533)
                      .+++.|||+++............     ..+.+++......++.++|+||+|+++|++++ +..||.+.........+..
T Consensus       170 ~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~d~~slG~~~~~~~~-~~~~f~~~~~~~~~~~~~g  243 (351)
T d1q8ya_         170 QIKIADLGNACWYDEHYTNSIQT-----REYRSPEVLLGAPWGCGADIWSTACLIFELIT-GDFLFKDDDHIAQIIELLG  243 (351)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSC-----GGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH-SSCCCCHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHC-CCCCCCCCCHHHHHHHHHC
T ss_conf             32222345531011123333222-----22222222222222333432320136501540-9404543226899998827


Q ss_pred             C------------------------------------CCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             8------------------------------------9888876888899999999872789678699999999
Q batch____       478 G------------------------------------YRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH  515 (533)
Q Consensus       478 ~------------------------------------~~~~~p~~~~~~~~~~li~~c~~~~P~~RPt~~~i~~  515 (533)
                      .                                    .....+..+++++ .+||.+||+.||++|||+.+|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~dli~~~L~~dP~~R~ta~eiL~  316 (351)
T d1q8ya_         244 ELPSYLLRNGKYTRTFFNSLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI-SDFLSPMLQLDPRKRADAGGLVN  316 (351)
T ss_dssp             SCCHHHHHHCTTHHHHBCCCBSSCCCCCCCCHHHHHHHTTCCCHHHHHHH-HHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             CCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHHH-HHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             89967864112102433444201233576686662000035773389999-99999866588222787889965


