281 c2vagA_ Probab=100.00  E-value=2.1e-38  Score=222.79  Aligned_columns=254  Identities=23%

Q ss_pred             CCCHHHEEEEEECCCCCCEEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEECCC
Q ss_conf             2475457886402547882799999779--9389999988861378999999999986088979------9885210459
Q batch____       256 EIPRNQLHLKRKLGDGNFGEVWYGKWRG--IVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNL------VKLYAVCTRE  327 (533)
Q Consensus       256 ~i~~~~~~~~~~LG~G~fg~V~~~~~~~--~~~VAvK~~~~~~~~~~~~~~E~~~l~~l~h~ni------v~~~g~~~~~  327 (533)
                      ++-.++|+++++||+|+||.||+|+++.  +..||||+++.+....+.+.+|+.+|++|+|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEE
Q ss_conf             82899998888885889999548878899999999999979876220357054676530574578786676321234304
Q batch____       328 EPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLA  407 (533)
Q Consensus       328 ~~~~iv~E~~~~gsL~~~l~~~~~~l~~~~~~~~~~qia~~l~~lH~~~~~h~dlk~~Nili~~~~~~~~~~kl~dfgls  407 (533)
                      ..++++++++..+.+..................+..+++.++.++|..+++|+|+++.||+++.+..    .++.+|+.+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~----~~~~~~~~~  164 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDY----TEAYNKRDE  164 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCE----EEEECCCEE
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC----EEECCCCCC
T ss_conf             0000122112367521112221110136565555544555554311012222345541589857886----200034543


Q ss_pred             EEECCCCCEEEECCCC---------CCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC-
Q ss_conf             5403787324423565---------786768977994689975789999999999999288899987798999999981-
Q batch____       408 RKLMEEDIYEARTGAK---------FPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVEL-  477 (533)
Q Consensus       408 ~~~~~~~~~~~~~~~~---------~~~~y~aPE~~~~~~~~~~sDv~S~Gv~l~El~t~G~~P~~~~~~~~~~~~i~~-  477 (533)
                      .............+..         ....+.+||......++.+.|+|++|+++|++.+ ++.|+...+..+.+..+.. 
T Consensus       165 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~  243 (330)
T c2vagA_         165 RTLINPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERI  243 (330)
T ss_dssp             EEESCCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHH
T ss_conf             34444321000146633267542001210232100000111123542102258731004-88988758968999999851


Q ss_pred             ------------------------------------------CCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             ------------------------------------------89888876888899999999872789678699999999
Q batch____       478 ------------------------------------------GYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH  515 (533)
Q Consensus       478 ------------------------------------------~~~~~~p~~~~~~~~~~li~~c~~~~P~~RPt~~~i~~  515 (533)
                                                                ....+.+..+++++ .+||.+||+.||++|||+.+|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         244 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL-FDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHH-HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHH-HHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             38899889744201212354656653210001110012333100235654589999-99999866588111776789967


