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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank301Aligned Residues227
% Identity23%Templatec3rnyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of human rsk1 c-terminal kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   282.......290.........300.........310.. .......320.........330.........340.........350.........360
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Query Sequence  RGIVEVAIKTMKPGTMSPEAFLQEAQIMKQC. DHPNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTDGSTLGIQALVD
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Template Sequence  VHNMEYAVKVID. . . . . . . KPSEEIEILLRYGQHPNIITLKDVY. . . . . . DLVTELMRGGELLDKI. LRQKFFSEREASF
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   436...440....... ..450.........460.........470.. .......480........ .490.........500.
 
   361........370.........380.........390.........400.........410.........420.........430.........440
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Query Sequence  MAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFT
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Template Sequence  VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT. . . . . . . . PCYTEVLKRQGYD
Template Known Secondary structure  TT
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GGGSSTT

GGG


TT

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   515....520.........530.........540.........550.........560.........570... ......580......
 
   441........450.........460.........470..... ....480.........490.........500.........510....
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Query Sequence  VKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQV. . . . . . ELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLY
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Template Sequence  EGCDIWSLGILLYTMLA. GYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETA. KDLVSKMLHVDPHQRLTAKQVL
Template Known Secondary structure  .SS
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   593......600......... 610.........620.........630.........640........ .650.........660.........670
 
   515 ....520.........530..
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Query Sequence  H. . FFDDYFVSTQPNYAPPS
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Template Sequence  QHPWVTQKDKLPQSQLSHQD
Template Known Secondary structure  TS
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   671........680.........690
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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