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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank92Aligned Residues258
% Identity43%Templatec2qobA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280. ........290.... .....300.........310.........320.........
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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKW. . . . RGIVEVAIKTMKP. . GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEP
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP
Template Known Secondary structure  B

GGG
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   615....620.........630.........640.........650.........660.........670.........680.........690....
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  FYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARK
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Template Sequence  VMIVTEMEN. GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV. . . . CKVSDFGLSRV
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   695....700... ......710.........720.........730.........740.........750........ .760.........
 
   410.........420.........430.........440.........450.........460.........470.........480.........
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Query Sequence  LMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPE
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Template Sequence  L. . . . . . . . . . . . KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA
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   771 ........780.........790.........800.........810.........820.........830........
 
   490.........500.........510.........520.........530.
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Query Sequence  QIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPP
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Template Sequence  AL. YQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT
Template Known Secondary structure  .T
SSGGGS

SGGGGGSB
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   852. ......860.........870.........880.........890..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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