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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank285Aligned Residues228
% Identity25%Templatec3alnB_
PDB info PDB header:transferaseChain: B: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 4; PDBTitle: crystal structure of human non-phosphorylated mkk4 kinase domain2 complexed with amp-pnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   244.....250.........260.........270.........280..... ....290.........300. ........310.........
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Query Sequence  RPDLSHDTQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEA. . . FLQEAQIMKQCDHPNLVK
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Template Sequence  SGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQ
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   320.........330.........340...... ...350.........360.........370..... ....380.........390.....
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Query Sequence  LYAVCTREEPFYIITEYMINGSLLQYL. . . RTDGSTLGIQALVDMAAQIANGMMYLEER. KLVHRDLAARNVLVGDKISG
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Template Sequence  FYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN.
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   164.....170.........180.........190.........200.........210.........220.........230.........240..
 
   396...400.........410.........420.........430.........440.........450.........460.........470.....
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Query Sequence  VPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQV
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Template Sequence  . . . IKLCDFGIS. . . . . . . . . . . . . . . . . . . . . . . . . . . . GQLYDVRSDVWSLGITLYELAT. GRFPYPDPP. . . . . . . .
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   243......250. ........260.........270... ......280..
 
   476...480.........490.........500.........510.....
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Query Sequence  ELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  . . QLSNSEEREFSPSF. INFVNLCLTKDESKRPKYKELLK
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   327..330.........340 .........350.........360...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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