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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank46Aligned Residues247
% Identity23%Templatec2c30A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase pak 6; PDBTitle: crystal structure of the human p21-activated kinase 6
Resolution1.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   258.260.........270.........280..... ....290.. .......300.........310.........320.........330.....
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Query Sequence  PRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTM. KPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITE
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Template Sequence  PRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME
Template Known Secondary structure  TTTTT

TTT

STT


TTB

TT
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   403......410.........420.........430.........440.........450.........460.........470.........480..
 
   336...340.........350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  YMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDI
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Template Sequence  FLQGGALTDIVSQVR. . LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR. . . . VKLSDFGFCAQISKDVP
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S
BTT

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SGGG
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   483......490....... ..500.........510.........520.........530......... 540.........550......
 
   416...420.........430.........440.........450.........460.........470......... 480.........490...
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Query Sequence  YEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGY. . RMPMPRGCPEQIYE
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Template Sequence  KRKLVGTP. . . YWMAPEVISRSLYATEVDIWSLGIMVIEMVD. GEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVL. R
Template Known Secondary structure 
B


S
G...GG

TT

B
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TTTTS
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TTGGGS
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   557..560.... .....570.........580.........590..... ....600.........610.........620.........630 .
 
   494.....500.........510.....
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Query Sequence  EVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  DFLERMLVRDPQERATAQELLD
Template Known Secondary structure  S
SSTTTS

T
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   633......640.........650....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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