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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank298Aligned Residues238
% Identity23%Templatec3kn5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:ribosomal protein s6 kinase alpha-5; PDBTitle: crystal structure of the c-terminal kinase domain of msk1 in complex2 with amp-pnp
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NQLHLK. . . RKLGDGNFGEVWYGKW. RGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCD. HPNLVKLYAVCTREEPFYIIT
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Template Sequence  QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKII. . SKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM
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TTTTTT..GGGTTT
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   421........430.........440.........450....... ..460.........470.........480.........490........
 
   335....340.........350.........360.........370.........380.........390.........400.........410....
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Query Sequence  EYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEED
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Template Sequence  ELLNGGELFERIKKK. KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTD. . . . . LEIKIIDFGFARLKP. . .
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   499500.........510... ......520.........530.........540.........550.... .....560.........
 
   415....420.........430.........440.........450.........460....... ..470........ .480....
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Query Sequence  IYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMH. . . . . . . NREVVEQVELG. . . YRMPMP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . PNGYDESCDLWSLGVILYTMLS. GQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW
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   574.....580.........590..... ....600.........610.........620.........630.
 
   485....490.........500.........510..... ....520.........530.
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Query Sequence  RGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH. . FFDDYFVSTQPNYAPP
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Template Sequence  KNVSQEA. KDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTP
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   654.....660 .........670.........680.........690.........700.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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