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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank38Aligned Residues244
% Identity27%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280..... ....290.........300.........310.........320.........330........
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMI
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Template Sequence  ESYFKV. . RKLGSYGEVLLCKEKNGHSEKAIKVIK. . KKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYE
Template Known Secondary structure  GT..

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   55....60 .........70.........80....... ..90.........100.........110.........120.........130
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  NGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEA
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Template Sequence  GGELFEQIINRH. KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS. LLNIKIVDFGLSSFFSKDYKLRD
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   149150.........160 .........170.........180.........190.........200... ......210.........220......
 
   419420.........430.........440.........450.........460.........470.........480..... ....490.....
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Query Sequence  RTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPR. . . GCPEQIYEEV
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Template Sequence  RLGTAY. . . YIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEA. KEL
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   227..230.. .......240. ........250.........260. ........270.........280.........290....... ..300
 
   496...500.........510.....
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Query Sequence  LLKCWDKTPDRRPTFDTLYH
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Template Sequence  IKLMLTYDYNKRCTAEEALN
Template Known Secondary structure  T
SSTTTS

T
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   301........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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