Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank198Aligned Residues240
% Identity23%Templatec3dlsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pas domain-containing serine/threonine-protein kinase; PDBTitle: crystal structure of human pas kinase bound to adp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280..... ....290......... 300.........310.........320.........
Predicted Secondary structure 









.





.........








Query SS confidence 

























.













. . . . . . . . .





























Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSP. . . . . . . . . EAFLQEAQIMKQCDHPNLVKLYAVCTREEP
Query Conservation          

 
 

 
         . 



         .........     
   
  
 
 


   
       
Alig confidence 

























.













.........





























Template Conservation    
 
   

 
 

 

 
        



 
                     

 

  
 
 


           
Template Sequence  QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF
Template Known Secondary structure 
SSSSS
STTTTSTTS
TTSTTTTT


TTB


SS
Template Predicted Secondary structure 


































Template SS confidence 















































































   997..1000.........1010.........1020.........1030.........1040.........1050.........1060.........1070......
 
   330.........340.........350.........360.........370.........380.........390.........400.........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  FYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARK
Query Conservation    

 
    


   
      
          


  
  

     
 


  



          

 




  
Alig confidence 
































































....










Template Conservation       
                             
   
  
                      ....      
    
Template Sequence  FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFT. . . . IKLIDFGSAAY
Template Known Secondary structure 

TTS
BT




TT
S

SGGG
TTS
....


TT
Template Predicted Secondary structure 





































....







Template SS confidence 















































































   1077..1080.........1090.........1100.........1110.........1120.........1130.........1140. ........1150..
 
   410.........420.........430........ .440.........450.........460.........470.........480........
Predicted Secondary structure 















.























Query SS confidence 




























.

















































Query Sequence  LMEEDIYEARTGAKFPIKWTAPEAATCGN. FTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCP
Query Conservation                    
 


      .    


 
 

 
 

 
 
  
            
        
    
Alig confidence 













...











.


















.









.......












Template Conservation                ...                  





 






.
  

     .......            
Template Sequence  LERGKLFYTFCGTI. . . EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF. EENPFCELEE. . . . . . . TVEAAIHPPYLVS
Template Known Secondary structure 

TT

B
S

S
G...GG

TT

B
S.SS
S
SSGGG.......GTTT



SS


Template Predicted Secondary structure 













...















.




.......









Template SS confidence 















































































   1153......1160...... ...1170.........1180.........1190........ .1200........ .1210.........1220.
 
   489490.........500.........510.....
Predicted Secondary structure 






Query SS confidence 


























Query Sequence  EQIYEEVLLKCWDKTPDRRPTFDTLYH
Query Conservation        

  
    
  


   
  
Alig confidence 


.






















Template Conservation     .  

   
  

  


  


 
Template Sequence  KEL. MSLVSGLLQPVPERRTTLEKLVT
Template Known Secondary structure  .T
SSGGGS

Template Predicted Secondary structure  .







Template SS confidence 


























   1222.. .....1230.........1240.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D