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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank306Aligned Residues242
% Identity17%Templatec3e3pB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase, putative glycogen synthase PDBTitle: glycogen synthase kinase from leishmania major
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.........300.........310.........320......... 330..
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEP. . . . . . . FYI
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Template Sequence  DRFQVTVQLGKEKS. . . . . . . . . TGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV
Template Known Secondary structure  TT


TT.........T



TT




TTB


SS
TT
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   18.20.........30. ........40.........50.........60.........70.........80........
 
   333......340... ......350.........360.........370.........380.........390.........400.........410
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Query Sequence  ITEYMINGSLL. . QYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKL
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Template Sequence  VMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA. DGTLKLCDFGSAKKL
Template Known Secondary structure 

S
BTT



TSTTT

B
S


GGGTT.TT

GGG
B

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   99100.........110.........120.........130.........140.........150.........160.. .......170.......
 
   411........420.........430.........440.........450.........460.........470.....
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Query Sequence  MEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQV. . . . . . . . . . . . . . .
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Template Sequence  . . SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML. GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL
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TTS


STTS
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TT
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   178.180.........190.........200.........210.........220.. .......230.........240.........250....
 
   476...480.........490.........500.........510.....
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Query Sequence  . . . . . . . . . . . . . . . . ELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEA. YDLLSALLQYLPEERMKPYEALC
Template Known Secondary structure 
TT


GGG






T
TT

SS.S
SSGGGS

TT
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   255....260.........270.........280...... ...290.........300.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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