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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank238Aligned Residues258
% Identity27%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.... .....300.........310.........320.........330........
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKP. GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMI
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Template Sequence  NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME
Template Known Secondary structure 


S



S
B
SSS
TT



S

SSGGGS


TTB




TT



T
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   3940.........50.........60.........70.........80.........90.........100.........110........
 
   339340...... ...350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  NGSLLQYL. . . RTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDI
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Template Sequence  NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFV. . . . PKITDFGISKKGTELDQ
Template Known Secondary structure  T
BTGGGSSSS


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TT
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   119120.........130.........140.........150.........160.........170....... ..180.........190....
 
   416...420.........430.........440.........450.........460.........470....... ..
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Query Sequence  YEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVEL. . . . . . . . . . . . . . . . GY
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Template Sequence  THLVVKGTLG. . YIDPEYFIKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL
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S
TT..T





T.

TT
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   195....200.... .....210.........220.........230.... .....240.........250.........260.........270.
 
   480.........490.........500.........510.........520.....
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Query Sequence  RMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQ
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Template Sequence  ADKIRPESLRKF. GDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE
Template Known Secondary structure  TT
S
.T
SSGGGS

SS
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   274.....280..... ....290.........300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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