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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank116Aligned Residues254
% Identity24%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280. ........290........ .300.........310.........320.........330
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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKW. RGIVEVAIKTMKPGTMS. . . . PEAFLQEAQIMKQCDHPNLVKLYAVCTREEPF
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Template Sequence  KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY
Template Known Secondary structure  T
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  YIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKL
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Template Sequence  YLVMEYIEGPTLSEYIESHG. PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKT. . . . LKIFDFGIA. . .
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   84.....90.........100... ......110.........120.........130.........140...... ...150.....
 
   411........420.........430.........440.........450.........460.........470.........480... ...
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Query Sequence  MEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPM. . . . PRG
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Template Sequence  . . . . . . . . . . . . . KTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKD
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   156...160.........170.........180......... 190.........200.........210.........220.
 
   487..490.........500....... ..510.........520.........530..
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Query Sequence  CPEQIYEEVLLKCWDKTPDRR. PTFDTLYHFFDDYFVSTQPNYAPPS
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Template Sequence  IPQSL. SNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYE
Template Known Secondary structure  S
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   237..240. ........250.........260.........270.........280..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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