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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank244Aligned Residues251
% Identity22%Templatec1vzoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280. ........290... ......300.........310.. .......320.....
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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKW. . . . RGIVEVAIKTMK. . . . . PGTMSPEAFLQEAQIMKQC. DHPNLVKLYAVCT
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Template Sequence  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ
Template Known Secondary structure 


GGGTTT
SSTTTT
SSSGGG


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   43......50.........60.........70.........80.........90.........100.........110.........120..
 
   326...330.........340.........350.........360.........370.........380.........390.........400.....
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Query Sequence  REEPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFG
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Template Sequence  TETKLHLILDYINGGELFTHLSQRE. RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH. . . . VVLTDFG
Template Known Secondary structure  TT



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   123......130.........140....... ..150.........160.........170.........180.........190 .......
 
   406...410.........420.........430.........440.........450.........460.........470........ .480..
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Query Sequence  LARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELG. . . YRMP
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Template Sequence  LSKEFVADETERAYDFCGTI. . EYMAPDIVRGGDDKAVDWWSLGVLMYELLT. GASPFTVDGEKNSQAEISRRILKSEPP
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GGGGGGG
GGGS

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   198.200.........210....... ..220.........230.........240....... ..250.........260.........270....
 
   483......490.........500........ .510.....
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Query Sequence  MPRGCPEQIYEEVLLKCWDKTPDRRP. . . . . TFDTLYH
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Template Sequence  YPQEMSALA. KDLIQRLLMKDPKKRLGCGPRDADEIKE
Template Known Secondary structure 

TTS
.T
SSGGGSTTSSTTTT
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   278.280...... ...290.........300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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