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Job DescriptionG5EE56
Confidence99.59%DateFri May 3 21:16:22 BST 2013
Rank413Aligned Residues87
% Identity20%Templatec3gxxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200... ......210....
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Query Sequence  EEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKRLDHDQG. YFITTRRTFRS
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Template Sequence  HPYYF. PFNGKQAEDYLRSK. . ERGDFVIRQSSRGDDHLAITWKLDKD. . . . . LFQHVDIQEXEKEXGKVLVVEGQRYHD
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   10.... .....20........ .30.........40.........50.... .....60.........70.........80.
 
   215....220.........230
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Query Sequence  LQELVRYYSDVPDGLC
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Template Sequence  LDQIIVEYLQNKIRLL
Template Known Secondary structure  T
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   86...90.........100.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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