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Job DescriptionG5EE56
Confidence99.87%DateFri May 3 21:16:22 BST 2013
Rank329Aligned Residues179
% Identity21%Templatec2b3oA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.. .......110. ........120.........130..
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Query Sequence  ETLVALYPYDSRADGDLSFQKGDAMYLLD. HSNCDWWYV. . . . . . . . . . . . . . . . . . . . RHQRTGQTGYVPRNFVAKQQT
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Template Sequence  GSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSD
Template Known Secondary structure  T
SSSSSTT
SSS
TTS
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TT
S
B

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   25....30.........40.........50.........60.........70.........80.........90.........100....
 
   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  IESEEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKRLDHDQGYFITTRRTF
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Template Sequence  PTSERWYHGHMSGGQAETLLQAKG. EPWTFLVRESLSQPGDFVLSVLSDQP. KSPLRVTHIKVM. . CEGGRYTVGGLETF
Template Known Secondary structure  GGG
TTB
TT


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TT
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B..

TTSBBSSSS

B
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   105....110.........120........ .130.........140.........150.... .....160...... ...170.........180
 
   213......220..... ....230.........240.........250......
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Query Sequence  RSLQELVRYYSDV. . . . PDGLCCQLTFPAPRLAPTRPDLSHDTQQNWE
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Template Sequence  DSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRFWEEFE
Template Known Secondary structure  SS

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GGGT


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   185....190.........200.........210.........220.........230..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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