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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank250Aligned Residues236
% Identity24%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280..... ....290... ......300.........310.. .......320.........330...
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMK. . . . PGTMSPEAFLQEAQIMKQC. DHPNLVKLYAVCTREEPFYII
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV
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TTTTT

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   353......360.........370.........380.........390.........400.........410.........420.........430..
 
   334.....340.........350.........360.........370.........380.........390.........400.........410...
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Query Sequence  TEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEE
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Template Sequence  MEFVNGGDLMFHIQKSR. RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGH. . . . CKLADFGMCKEGICG
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   433......440......... 450.........460.........470.........480.........490.. .......500.......
 
   414.....420.........430.........440.........450.........460.........470.........480.........490...
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Query Sequence  DIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYE
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Template Sequence  TPD. . . . . . . . . . . YIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILNDE. VVYPTWLHEDA. T
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   517.. 520.........530.........540......... 550.........560.........570 .........580. .
 
   494.....500......... 510....
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Query Sequence  EVLLKCWDKTPDRRPT. . . . . . FDTLY
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Template Sequence  GILKSFMTKNPTMRLGSLTQGGEHAIL
Template Known Secondary structure  T
SSGGGSTTSGGGT
T
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   583......590.........600.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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