Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank153Aligned Residues248
% Identity25%Templatec2y94A_
PDB info PDB header:transferaseChain: A: PDB Molecule:5'-amp-activated protein kinase catalytic subunit alpha-1; PDBTitle: structure of an active form of mammalian ampk
Resolution3.24 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280..... ....290... ......300.........310.........320.........330
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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMK. . . . PGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPF
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Template Sequence  RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI
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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  YIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKL
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Template Sequence  FMVMEYVSGGELFDYICKNG. RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMN. . . . AKIADFGLSNMM
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   90.........100......... 110.........120.........130.........140.........150.. .......160....
 
   411........420.........430.........440.........450.........460.........470.........480.........490
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Query Sequence  MEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQ
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Template Sequence  SDGEFLRSCGSPNY. . . AAPEVISGRLYAGPEVDIWSSGVILYALLC. GTLPFDDDHVPTLFKKICDG. IFYTPQYLNPS
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B


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   165....170........ .180.........190.........200........ .210.........220........ .230.........
 
   491........500.........510....
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Query Sequence  IYEEVLLKCWDKTPDRRPTFDTLY
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Template Sequence  V. ISLLKHMLQVDPMKRATIKDIR
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   241 ........250.........260...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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