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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank297Aligned Residues234
% Identity22%Templatec3gc0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:kinase, cmgc cdk; PDBTitle: structure of the cmgc cdk kinase from giardia lamblia in complex with2 amp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMI
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Template Sequence  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE. . . . HTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE
Template Known Secondary structure  GG
SSSTTTT


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   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  NGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEA
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Template Sequence  NDLKKYMDKNPD. . VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVETPV. . . LKIGDFGLARAFEIITLW. .
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GGG



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   96...100....... ..110.........120.........130.........140.........150 .........160........
 
   419420.........430........ .440.........450.........460.........470......
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Query Sequence  RTGAKFPIKWTAPEAATCGN. FTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVE. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . YRPPEILLGSRHYSTSVDIWSIACIWAEMLM. KTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK
Template Known Secondary structure  .........G

TT
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TTTSTTGGGSTT

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   182.......190.........200.........210.. .......220.........230.........240.........250.
 
   477..480.........490.........500.........510.....
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Query Sequence  . . . . . . . . LGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  QSFPKFRGKTLKRVLGALLDDEG. LDLLTAMLEMDPVKRISAKNALE
Template Known Secondary structure  TTS






GGGS
.T
SSGGGS

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   252.......260.........270.... .....280.........290.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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