Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank8Aligned Residues375
% Identity37%Templatec4fl2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase syk; PDBTitle: structural and biophysical characterization of the syk activation2 switch
Resolution2.19 Å
Model Dimensions (Å)X:77.509 Y:82.947 Z:57.621

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  ESEEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKRLDHDQGYFITTRRTFR
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Template Sequence  EKMPWFHGKISREESEQIVLIGSKTNGKFLIRARD. NNGSYALCLL. . . . . . HEGKVLHYRIDK. DKTGKLSIPEGKKFD
Template Known Secondary structure  GGSTTB

S

SSS

TT
.TTT......TT.
TTS
STT


BS
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   164.....170.........180.........190........ .200........ .210.........220 .........230.....
 
   214.....220.........230.........240.........250..... ....260....... ..270........
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Query Sequence  SLQELVRYYSDVPDGLCCQLTFPAPRLAPTRPDLSHDTQQNW. . . . . . . . . . . . . . EIPRNQLHLKRK. LGDGNFGEVWY
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Template Sequence  TLWQLVEHYSYKADGLLRVLTVPCQKIGTQREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKK
Template Known Secondary structure  STTB
TTSSS


SB


S


TT

GGGSGGGS
GGGSTTS


SSSB

GGGTT
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   236...240.........250.........260.........270.........280.........290.........300.........310.....
 
   279280..... ....290..... ....300.........310.........320.........330.........340.........350..
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Query Sequence  GKWRGIV. . . EVAIKTMKPG. . . TMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTDGST
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Template Sequence  GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC. EAESWMLVMEMAELGPLNKYLQQNR. H
Template Known Secondary structure  TT
SGGG
GGG


TTB

.SSS

TT
B
T.T
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   388.390.........400.........410.........420.........430......... 440.........450.........460.... .
 
   353......360.........370.........380.........390.........400.........410..... ....420.........430.
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Query Sequence  LGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDI. YEARTGAKFPIKWTAP
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Template Sequence  VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY. . . . AKISDFGLSKALRADENYYKAQTHGKWPVKWYAP
Template Known Secondary structure  S
TT


S

SGGGTT....

TTTT

S
BTTB
GGGG

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   466...470.........480.........490.........500....... ..510.........520.........530.........540.
 
   432.......440.........450.........460.........470.........480.........490.........500.........510.
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Query Sequence  EAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFD
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Template Sequence  ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM. YDLMNLCWTYDVENRPGFA
Template Known Secondary structure 



TTT

SSTT

TT





TT

.T
SSTTTS

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   542.......550.........560.........570.........580.........590.........600. ........610.........620
 
   512.......520...
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Query Sequence  TLYHFFDDYFVS
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Template Sequence  AVELRLRNYYYD
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   621........630..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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