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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank276Aligned Residues239
% Identity25%Templatec4aaaA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cyclin-dependent kinase-like 2; PDBTitle: crystal structure of the human cdkl2 kinase domain
Resolution1.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRG. IVEVAIKTMKPGTMS. . . PEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITE
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Template Sequence  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE
Template Known Secondary structure  GGGGGGTTSSTTT

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   336...340.........350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  YMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDI
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Template Sequence  FVDHTILDDLELFPN. GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFAEV. . . . . . . . . .
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Query Sequence  YEARTGAKFPIKWTAPEAATC. GNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVE. . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM. GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP
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   163......170.........180.........190....... ..200.........210.........220.........230...
 
   477..480.........490.........500.........510..... ....
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Query Sequence  . . . . . . . . . . . . LGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH. . FFDD
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Template Sequence  VFAGVRLPEIKEREPLERRYPKLSEVV. IDLAKKCLHIDPDKRPFCAELLHHDFFQM
Template Known Secondary structure  GGTT





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   234.....240.........250.........260 .........270.........280.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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