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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank178Aligned Residues244
% Identity24%Templatec2i0eB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase c-beta ii; PDBTitle: structure of catalytic domain of human protein kinase c2 beta ii complexed with a bisindolylmaleimide inhibitor
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280... ......290... ......300.........310.. .......320.........330...
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRG. IVEVAIKTMK. . . . PGTMSPEAFLQEAQIMKQC. DHPNLVKLYAVCTREEPFYII
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Template Sequence  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV
Template Known Secondary structure  TTTTTTSS
T
T
TT

TTB

TT
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   340.........350.........360.........370.........380.........390.........400.........410.........
 
   334.....340.........350.........360.........370.........380.........390.........400.........410...
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Query Sequence  TEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEE
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Template Sequence  MEYVNGGDLMYHIQQVG. RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH. . . . IKIADFGMCKENIWD
Template Known Secondary structure 


S
BTTS.S

TT
B



SGGG
TTS
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TT
B
S

T
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   420.........430...... ...440.........450.........460.........470......... 480.........490....
 
   414.....420.........430.........440.........450.........460.........470.........480.........490...
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Query Sequence  DIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYE
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Template Sequence  GVTTKFCGTPD. . . YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIME. HNVAYPKSMSKEA. V
Template Known Secondary structure  T

B


S
TT...T

TT

B
T.SS
SS

SS.





TTS
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   495....500..... ....510.........520.........530..... ....540.........550.... .....560....... .
 
   494.....500......... 510....
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Query Sequence  EVLLKCWDKTPDRRPT. . . . . FDTLY
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Template Sequence  AICKGLMTKHPGKRLGCGPEGERDIK
Template Known Secondary structure  SS
SSGGGSTT
STT
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   570.........580.........590.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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