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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank216Aligned Residues247
% Identity27%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280... ......290.... .....300.........310.........320.........330....
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Query Sequence  RNQLHLKRKLGDGNFGEVWYGKWRG. IVEVAIKTMKP. . . GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIIT
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Template Sequence  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   335....340...... ...350.........360.........370.......
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Query Sequence  EYMINGSLLQYL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTDGSTLGIQALVDMAAQIANGMMYLEERKL
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Template Sequence  ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGI
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   378.380.........390.........400.........410.........420.........430..... ....440.........450.....
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Query Sequence  VHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAAT. . CGNFTVKSDVWSYGILLYEI
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Template Sequence  CHRDIKPENFLFSTNKSFE. . IKLVDFGLSKEFYKLNNGAGT. . . . . . PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL
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   172.......180.........190 .........200.........210. ........220.........230.........240...
 
   456...460.........470......... 480.........490.........500.........510.....
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Query Sequence  MTKGQVPYPGMHNREVVEQVELGY. . . RMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  LM. GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLA. RDLLSNLLNRNVDERFDAMRALQ
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   252. ......260.........270.........280......... 290.........300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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