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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank169Aligned Residues263
% Identity17%Templatec3op5B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: human vaccinia-related kinase 1
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHLKRKLGD. . GNFGEVWYGKWRGIV. . . . . . EVAIKTMKPGTMS. . . . . . . . . . . . PEAFLQEAQIMKQCDHP
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Template Sequence  EIITDMAAAAWKVGLPIGQFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYL
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   316...320..... ....330.........340.........350.........360.........370.........380.........390.
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Query Sequence  NLVKLYAVCT. . . . REEPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGD
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Template Sequence  GVPKYWGSGLHDKNGKSYRFMIMDRF. GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY
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GGGS
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Query Sequence  KISGVPVVKVADFGLARKLMEEDIYEARTGAK. . . . . FPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGM
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Template Sequence  KNPDQ. . VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT. GHLPWEDN
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   188.190.. .......200.........210.........220.........230.........240.........250...... ...260....
 
   467..470.........480. ........490.........500.........510.........520...
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Query Sequence  HNREVVEQVELGYRM. . . . . . . . . . PMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVS
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Template Sequence  LKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEI. AKYMETVKLLDYTEKPLYENLRDILLQGLKA
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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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