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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank175Aligned Residues269
% Identity14%Templatec2jiiA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk3 molecule: vaccinia PDBTitle: structure of vaccinia related kinase 3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPG. . . . . . . . . . . TMSPEAFLQEAQIMKQCDHPNLVKLYAV.
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Template Sequence  DKSGRQWKLKSFQTRDNQGILYEAAPTS. . KFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFG
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TTS
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TTST

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S




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Query Sequence  CTREEPFYIITEYMINGSLLQYLRTDGST. LGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVA
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Template Sequence  VHQDKYRFLVLPSL. GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQ. . VTLA
Template Known Secondary structure  TTT

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SGGG


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GGGTT..
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Query Sequence  DFGLARKLMEEDIYEAR. . . . . TGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYP. . GMHNREVVEQV
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Template Sequence  GYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY. GFLPWTNCLPNTEDIMKQK
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GGG
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SSGGG





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   326...330.........340.........350.........360.........370.........380..... ....390.........400....
 
   476.. .480.........490.........500.........510.........520.........530.
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Query Sequence  ELG. . . . . . . . YRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPP
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Template Sequence  QKFVDKPGPFVGPCGHWIRPSETL. QKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDP
Template Known Secondary structure  S



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   405....410.........420........ .430.........440.........450.........460.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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