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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank231Aligned Residues252
% Identity21%Templatec1ua2A_
PDB info PDB header:cell cycle, transferaseChain: A: PDB Molecule:cell division protein kinase 7; PDBTitle: crystal structure of human cdk7
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280..... ....290.........300.........310.........320.........330.........340.
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Query Sequence  HLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGS
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Template Sequence  EKLDFLGEGQFATVYKARDKNTNQIVAIKKIN. . . . . . RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL
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   13......20.........30.........40.... .....50.........60.........70.........80......
 
   342.......350.........360.........370.........380.........390.........400.........410.........420.
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Query Sequence  LLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTG
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Template Sequence  EVIIKDNSL. VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV. . . . LKLADFGLAKSFGSPNRAYHQVV
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   99100....... ..110.........120.........130.........140.........150 .........160.........170...
 
   422.......430........ .440.........450.........460.........470.........480...
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Query Sequence  AKFPIKWTAPEAATCGN. FTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPM. . . . . . . . . . . . . . . . .
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Template Sequence  TRW. . . YRAPELLFGARMYGVGVDMWAVGCILAELLL. RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK
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   175.. ..180.........190.........200........ .210.........220.........230.........240.........250
 
   484.....490.........500.........510.........520.........530...
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Query Sequence  . . . . . . . . . . PRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPPSA
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Template Sequence  SFPGIPLHHIFSAAGDDL. LDLIQGLFLFNPCARITATQA. . . LKMKYFSNRPGPTPGCQ
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   251........260........ .270.........280......... 290.........300......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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