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Job Description | G5EE56 | Confidence | 99.59% | Date | Fri May 3 21:16:22 BST 2013 |
Rank | 413 | Aligned Residues | 87 |
% Identity | 20% | Template | c3gxxB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcription elongation factor spt6; |
PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
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Resolution | 2.40 Å |
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136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
E | E | W | Y | A | G | K | I | P | R | N | R | A | E | R | L | V | L | S | S | H | L | P | K | G | T | F | L | I | R | E | R | E | A | D | T | R | E | F | A | L | T | I | R | D | T | D | D | Q | R | N | G | G | T | V | K | H | Y | K | I | K | R | L | D | H | D | Q | G | . |
Y | F | I | T | T | R | R | T | F | R | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | P | Y | Y | F | . |
P | F | N | G | K | Q | A | E | D | Y | L | R | S | K | . |
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E | R | G | D | F | V | I | R | Q | S | S | R | G | D | D | H | L | A | I | T | W | K | L | D | K | D | . |
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L | F | Q | H | V | D | I | Q | E | X | E | K | E | X | G | K | V | L | V | V | E | G | Q | R | Y | H | D |
Template Known Secondary structure |   |
| T | T | B |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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10 | . | . | . | . | |
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. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
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215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | Q | E | L | V | R | Y | Y | S | D | V | P | D | G | L | C |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | D | Q | I | I | V | E | Y | L | Q | N | K | I | R | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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