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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank283Aligned Residues253
% Identity21%Templatec3begA_
PDB info PDB header:transferase/splicingChain: A: PDB Molecule:serine/threonine-protein kinase srpk1; PDBTitle: crystal structure of sr protein kinase 1 complexed to its substrate2 asf/sf2
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280..... ....290.........300.........310.... .....320......
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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDH. . . . . . . . PNLVKLYAVCTR
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Template Sequence  DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI
Template Known Secondary structure 
TTT
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S
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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   327. .330.........340.........350.........360......... 370.........380.........390....
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Query Sequence  EE. . . . PFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGM. MYLEERKLVHRDLAARNVLVGDKIS. . . . . . .
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Template Sequence  SGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA
Template Known Secondary structure  B
SS
B






BTTTS


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SGGG


T
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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   395....400.........410.........420.........430.........440.........450........
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Query Sequence  . . . . . . . . . . . . . . . . GVPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTK
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Template Sequence  EAAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE. . . . . DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELAT.
Template Known Secondary structure  T




S

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T.
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   234.....240.........250.........260.........270. ........280.........290.........300.......
 
   459460.........470........ .480.........490.
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Query Sequence  GQVPYPGMHNREVVEQVELG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YRMPMPRGCPEQI
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Template Sequence  GDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGF
Template Known Secondary structure  SS
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SSS

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   547..550.........560.........570.........580.........590.........600.........610.........620......
 
   492.......500.........510.....
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Query Sequence  YEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  . TDFLLPMLELIPEKRATAAECLR
Template Known Secondary structure  .T
SSTTTS

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   627..630.........640.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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