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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank182Aligned Residues266
% Identity37%Templatec2yhvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alk tyrosine kinase receptor; PDBTitle: structure of l1196m mutant anaplastic lymphoma kinase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   253......260.........270.........280.........290... ......300.........310.........320.........330
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Query Sequence  QNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMK. . PGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPF
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Template Sequence  DLKEVPRKNITL. . . IRGLAFGEVYEGQV. . PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR
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   1107..1110........ .1120.........1130.. .......1140.........1150.........1160.........1170.........1180.
 
   331........340........ .350.........360.........370.........380.........390.........400....
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Query Sequence  YIITEYMINGSLLQYLRT. . . . . . DGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADF
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Template Sequence  FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP. GRVAKIGDF
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   1193......1200.........1210.........1220.........1230.........1240.........1250.........1260.. .......1270.
 
   405....410.........420.........430.........440.........450.........460.........470.........480....
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Query Sequence  GLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMP
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Template Sequence  GMARDIYRGGCA. . . . . . MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP
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   1272.......1280... ......1290.........1300.........1310.........1320.........1330.........1340.....
 
   485....490.........500.........510.........520.........530.
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Query Sequence  RGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPP
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Template Sequence  KNCPGPV. YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTAL
Template Known Secondary structure  TT

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   1352...... .1360.........1370.........1380.........1390.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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