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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank37Aligned Residues250
% Identity22%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270.........280.........290...... ...300.........310.........320.........330.....
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Query Sequence  RNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGT. . . MSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITE
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVLAG. QEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD
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TTTT.S
S


BTTB


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   10.........20.........30.... .....40.........50.........60.........70.........80........
 
   336...340.........350.........360.........370.........380.........390.........400.........410.....
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Query Sequence  YMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDI
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Template Sequence  LVTGGELFEDIVARE. YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLK. GAAVKLADFGLAIEV. . EGE
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B

B
S.


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   91........100..... ....110.........120.........130.........140........ .150.........160... ...
 
   416...420.........430.........440.........450.........460.........470.........480 .........490..
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Query Sequence  YEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYR. . . MPMPRGCPEQIY
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Template Sequence  QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA.
Template Known Secondary structure 

B


S
S
GGG

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B
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S


SST




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   167..170.........180.........190.........200........ .210.........220.........230.........240....
 
   493......500.........510.....
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Query Sequence  EEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  KDLINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

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   245....250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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