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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank229Aligned Residues236
% Identity25%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMK. . . . PGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIIT
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVL
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   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   335....340.........350.........360.........370.........380.........390.........400.........410....
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Query Sequence  EYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEED
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Template Sequence  EICRRRSLLELHKRRK. AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD. . . . VKIGDFGLATKI. . . .
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   117..120.........130.. .......140.........150.........160.........170..... ....180.......
 
   415....420.........430.........440.........450.........460.........470.........480.........490....
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Query Sequence  IYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . HSFEVDIWSLGCILYTLLV. GKPPFETSCLKETYIRIKKNE. YSVPRHINPVA. SA
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   214.....220.........230.. .......240.........250... ......260.... ..
 
   495....500.........510.........520.........530...
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Query Sequence  VLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPPSA
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Template Sequence  LIRRMLHADPTLRPSVAELLT. . DEFFTSGYAPMRLPTS
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   267..270.........280....... ..290.........300...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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