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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank98Aligned Residues248
% Identity24%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280..... ....290.........300.........310.........320.........330........
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMI
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS
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S



SSTTT

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TTB


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T
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   7..10.........20.........30.........40...... ...50.........60.........70.........80.....
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  NGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEA
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Template Sequence  GGELFDRIEPDI. GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN. . . . LKISDFGLATVFRYNNRERL
Template Known Secondary structure  TGGGGSBTTT.B

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SGGG
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   8990.........100 .........110.........120.........130.........140... ......150.........160...
 
   419420.........430........ .440.........450.........460.........470..... ....480.........490.....
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Query Sequence  RTGAKFPIKWTAPEAATCGN. FTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQV. . ELGYRMPMPRGCPEQIYEEV
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Template Sequence  LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP. LAL
Template Known Secondary structure  B
S

S
GGGS

SSB
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SS

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TTSTTGGGT
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   164.....170.........180.........190.........200... ......210.........220.........230........ .240.
 
   496...500.........510.....
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Query Sequence  LLKCWDKTPDRRPTFDTLYH
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Template Sequence  LHKILVENPSARITIPDIKK
Template Known Secondary structure  S
SSTTTS

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   242.......250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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