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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank127Aligned Residues256
% Identity28%Templatec4f1oA_
PDB info PDB header:transferase, signaling proteinChain: A: PDB Molecule:serine/threonine-protein kinase roco4; PDBTitle: crystal structure of the l1180t mutant roco4 kinase domain from d.2 discoideum bound to appcp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280. ........290........ .300.........310.........320......
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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKW. RGIVEVAIKTMKPGTMS. . . . . . . . PEAFLQEAQIMKQCDHPNLVKLYAVCTR
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Template Sequence  TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN
Template Known Secondary structure  B

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   1020.........1030.........1040.........1050.........1060.........1070.........1080.........1090.........
 
   327..330.........340.........350.........360.........370...... ...380.........390...... ...400...
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Query Sequence  EEPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERK. . LVHRDLAARNVLVGDKISGV. PVVKVAD
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Template Sequence  PP. . RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD
Template Known Secondary structure  TT..

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   1100. ........1110.........1120.........1130.........1140.........1150.........1160.........1170.......
 
   404.....410.........420.........430..... ....440.........450.........460.........470. .......
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Query Sequence  FGLARKLMEEDIYEARTGAKFPIKWTAPEAAT. . CGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREV. . . VEQVELG
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Template Sequence  FGTS. . . . . QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT. GEGPFDEYSYGKIKFINMIREEG
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   1178.1180. ........1190.........1200.........1210.........1220........ .1230.........1240.........1250.
 
   479480.........490.........500.........510.........520
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Query Sequence  YRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDY
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Template Sequence  LRPTIPEDCPPRL. RNVIELCWSGDPKKRPHFSYIVKELSEL
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   1252.......1260.... .....1270.........1280.........1290..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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