Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank199Aligned Residues257
% Identity17%Templatec2v62A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk2; PDBTitle: structure of vaccinia-related kinase 2
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270 .........280. ........290.........300 .........310.........
Predicted Secondary structure 


....


.









..............




Query SS confidence 











. . . .










.


















. . . . . . . . . . . . . .


















Query Sequence  RNQLHLKRKLGD. . . . GNFGEVWYGKW. RGIVEVAIKTMKPGTMSPE. . . . . . . . . . . . . . AFLQEAQIMKQCDHPNLVK
Query Conservation           

 ....
 

 
     .     



          ..............    
   
  
 
 


 
Alig confidence 











....










.


















..............


















Template Conservation    
  
 
        
    

 
         
 



          
            
        
    
  
Template Sequence  PEGKVLDDMEGNQWVLGKKILIYLAFPTNKPEKDARHVVKVEYQEGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL
Template Known Secondary structure 
TT

TTS


SSS
GGG






T
S





Template Predicted Secondary structure 





























Template SS confidence 















































































   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   320.... .....330.........340.........350.........360.........370.........380.........390.....
Predicted Secondary structure  ....

































Query SS confidence 




. . . .






































































Query Sequence  LYAVC. . . . TREEPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISG
Query Conservation    
  ....       

 
    


   
      
          


  
  

     
 


  



      
Alig confidence 




....












.











.











































Template Conservation                  



  .   
   
    . 
       
  

  

  

   







 



      
Template Sequence  FYGSGLTEFKGRSYRFMVMERL. GIDLQKISGQNG. TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD
Template Known Secondary structure  SSS

.
BGGG.B

TT
S

SGGGSSSTT
Template Predicted Secondary structure 







.




.

















Template SS confidence 















































































   103......110.........120.... .....130...... ...140.........150.........160.........170.........180
 
   396...400.........410.........420.. .......430.........440.........450.........460........
Predicted Secondary structure 

















.....



















..
Query SS confidence 


























. . . . .













































. .
Query Sequence  VPVVKVADFGLARKLMEEDIYEARTGA. . . . . KFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHN. .
Query Conservation      

 




               .....     
 


          


 
 

 
 

 
 
  
      ..
Alig confidence 
..























.....


































.









..
Template Conservation   ..  
 


                       

  
 


       
 
 





 

 

  .
  
        
Template Sequence  Q. . VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC. GKLPWEQNLKDP
Template Known Secondary structure  S..


TT
SSGGG







GGG
S
S
TTT

T



.SS
TTGGGTT
Template Predicted Secondary structure 
..






























.










Template SS confidence 















































































   181 ........190.........200.........210.........220.........230.........240..... ....250.......
 
   469470.........480.........490.........500.........510.........520
Predicted Secondary structure  .......


















Query SS confidence  . . . . . . .



















































Query Sequence  . . . . . . . REVVEQVELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDY
Query Conservation  .......      
        
          

  
    
  


   
   
   
Alig confidence  .......



















































Template Conservation                                
   
       
  

    
   
   
Template Sequence  VAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH
Template Known Secondary structure  TTTS
TTS

T

TT




TT
Template Predicted Secondary structure 


















Template SS confidence 


























































   258.260.........270.........280.........290.........300.........310......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D