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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank2Aligned Residues450
% Identity42%Templatec2fo0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase abl1 (1b isoform); PDBTitle: organization of the sh3-sh2 unit in active and inactive forms of the2 c-abl tyrosine kinase
Resolution2.27 Å
Model Dimensions (Å)X:72.899 Y:73.498 Z:50.663

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
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Query Sequence  NGRGGGGGGGAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDWWYVRHQRTGQTGYVPRNFVAKQQTIESEEWY
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Template Sequence  NKENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQT. KNGQGWVPSNYITPVNSLEKHSWY
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TTTT

GGGS
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STTB

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TTSS.TTGGGTTSGGGSTT
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   68.70.........80.........90.........100.........110.........120.. .......130.........140......
 
   140.........150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  AGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKRLDHDQGYFITTRRTFRSLQELV
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Template Sequence  HGPVSRNAAEYLLSSG. . INGSFLVRESESSPGQRSISLR. . . . . . YEGRVYHYRINT. ASDGKLYVSSESRFNTLAELV
Template Known Secondary structure 

TSSS..
TT
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BSS
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   148.150.........160... ......170.........180..... ....190....... ..200.........210........
 
   220.........230.........240.........250.........260.........270.........280... ......290........
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Query Sequence  RYYSDVPDGLCCQLTFPAPRLAPTRPDLSHDTQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRG. IVEVAIKTMKPGTMS
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Template Sequence  HHHSTVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME
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SSS
SSTT

B

GGGSGGGTTSSGGGT

TTS

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   219220.........230.........240.........250.........260.........270.........280.........290........
 
   299300.........310.........320.........330.........340......... 350.........360.........370.......
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Query Sequence  PEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTD. GSTLGIQALVDMAAQIANGMMYLEERKL
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Template Sequence  VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF
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TTB


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   299300.........310.........320.........330.........340.........350.........360.........370........
 
   378.380.........390.........400.........410.........420.........430.........440.........450.......
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Query Sequence  VHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMT
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Template Sequence  IHRNLAARNCLVGENHL. . . . VKVADFGLSRLM. TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT
Template Known Secondary structure 
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SGGG
GGG
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   379380.........390..... ....400....... ..410.........420.........430.........440.........450...
 
   458.460.........470.........480.........490.........500.........510.........520.....
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Query Sequence  KGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQ
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Template Sequence  YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKV. YELMRACWQWNPSDRPSFAEIHQAFETMFQESS
Template Known Secondary structure  TS

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   454.....460.........470.........480....... ..490.........500.........510.........520
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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