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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank234Aligned Residues240
% Identity20%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   253......260.........270.........280.........290......... 300.........310... ......320.......
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Query Sequence  QNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMSP. . . EAFLQEAQIMKQCD. . HPNLVKLYAVCTRE
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Template Sequence  QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD
Template Known Secondary structure 
TT

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TT


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S
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   516...520.........530.........540.........550.........560.........570.........580.........590.....
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  EPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLA
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Template Sequence  QYIYMVMECGNIDLNSWLKKKKS. . IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. . . . . GMLKLIDFGIA
Template Known Secondary structure  S


S
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   596...600.........610........ .620.........630.........640.........650....... ..660........
 
   408.410.........420.........430........ .440.........450.........460..... ....470.........480 ....
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Query Sequence  RKLMEEDIYEARTGAKFPIKWTAPEAATCGN. FTVKSDVWSYGILLYEIMTKGQVPYPG. MHNREVVEQVELGYR. MPMP
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Template Sequence  . . . . . . . . . . . . . . NQGTVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFP
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   669670.........680.........690.........700..... ....710.........720.........730...
 
   485....490.........500.........510.....
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Query Sequence  RGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  DIPEKDL. QDVLKCCLKRDPKQRISIPELLA
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S
.T
SSTTTS

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   758.760.... .....770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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