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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank187Aligned Residues260
% Identity20%Templatec3p1aA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated tyrosine- and threonine-specific cdc2- PDBTitle: structure of human membrane-associated tyrosine- and threonine-2 specific cdc2-inhibitory kinase myt1 (pkmyt1)
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  APRLAPTRPDLSHDTQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEA. . . FLQEAQIMKQC
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Template Sequence  RGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV
Template Known Secondary structure  S

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TT

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   313......320.........330.........340.........350.........360.........370.........380.........390.
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Query Sequence  . DHPNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGD
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Template Sequence  GQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA. SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP
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TTB

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SGGG
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   165....170.........180.........190.........200... ......210.........220.........230.........240...
 
   392.......400.........410.........420.........430.........440.........450.........460.........470.
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Query Sequence  KISGVPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREV
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Template Sequence  RGR. . . . CKLGDFGLLVELGVQEGD. . . . . . . . . PRYMAPELLQ. GSYGTAADVFSLGLTILEVAC. NMELPHG. . GEGW
Template Known Secondary structure  GG
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GGGGG.T

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   244.. ...250.........260.... .....270.... .....280.........290..... ....300.. ....
 
   472.......480.........490.........500.........510.....
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Query Sequence  VEQVELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  QQLRQGYLPPEFTAGLSSEL. RSVLVMMLEPDPKLRATAEALLA
Template Known Secondary structure  TTT


TTS
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SSTTTS

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   313......320.........330.. .......340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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