Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank47Aligned Residues249
% Identity36%Templatec4aojA_
PDB info PDB header:transferaseChain: A: PDB Molecule:high affinity nerve growth factor receptor; PDBTitle: human trka in complex with the inhibitor az-23
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   255....260.........270.........280... ......290.... .....300.........310.........320.........330
Predicted Secondary structure 











...



.












Query SS confidence 




























. . .










.



































Query Sequence  WEIPRNQLHLKRKLGDGNFGEVWYGKWRG. . . IVEVAIKTMKP. GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPF
Query Conservation    
          

 
 

 
       ...   



    .          
   
  
 
 


   
        
Alig confidence 




























...










.



































Template Conservation    
          

 
 

 

            



 
             

 

  
 
 


            
Template Sequence  HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL
Template Known Secondary structure 
B

GGG
SSSSS


S

STT


TTB


SSSS
Template Predicted Secondary structure 


































Template SS confidence 















































































   503......510.........520.........530.........540.........550.........560.........570.........580..
 
   331........340.........350.. .......360.........370.........380.........390.........400.......
Predicted Secondary structure 









...





























Query SS confidence 





















. . .






















































Query Sequence  YIITEYMINGSLLQYLRTDGST. . . LGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLA
Query Conservation   

 
    


   
      ...
          


  
  

     
 


  



          

 




Alig confidence 





















...









































....








Template Conservation    
 

     
                                                       ....         
Template Sequence  LMVFEYMRHGDLNRFLRSHGPDPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV. . . . VKIGDFGTM
Template Known Secondary structure 

TT
BTSS



S

TT


S


GGGTTT....





Template Predicted Secondary structure 


































....








Template SS confidence 















































































   586...590.........600.........610.........620.........630.........640.........650.. .......660.
 
   408.410.........420.........430.........440.........450.........460.........470.........480.......
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  RKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGC
Query Conservation                      
 


          


 
 

 
 

 
 
  
            
        
   
Alig confidence 
................






























































Template Conservation   ................     


           

 
 

 



 
 
  
            
            
Template Sequence  L. . . . . . . . . . . . . . . . PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRAC
Template Known Secondary structure 
................
GGG

TT



TTS

TT
SS
T





TT
Template Predicted Secondary structure 
................






































Template SS confidence 















































































   689 690.........700.........710.........720.........730.........740.........750..
 
   488.490.........500.........510.........520....
Predicted Secondary structure 









Query SS confidence 




































Query Sequence  PEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVST
Query Conservation         

  
    
  


   
   
       
Alig confidence 



.































Template Conservation     
.  

  

  

  


  


  
  
   
Template Sequence  PPEV. YAIMRGCWQREPQQRHSIKDVHARLQALAQAP
Template Known Secondary structure 
.

SSTTTS

S
Template Predicted Secondary structure 
.









Template SS confidence 




































   753... ...760.........770.........780........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D