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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank128Aligned Residues232
% Identity25%Templatec4g3dE_
PDB info PDB header:transferaseChain: E: PDB Molecule:nf-kappa-beta-inducing kinase; PDBTitle: crystal structure of human nf-kappab inducing kinase (nik)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIIT
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Template Sequence  DYEYREEVHWATHGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA. . . . EELMACAGLTSPRIVPLYGAVREGPWVNIFM
Template Known Secondary structure  TTB

BTTT


SSSS
TTT

TTT

T....TTTT


TTB

TT
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   390.........400.........410.........420.........430.... .....440.........450.........460.....
 
   335....340.........350.........360.........370.........380.........390.........400.........410....
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Query Sequence  EYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEED
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Template Sequence  ELLEGGSLGQLVKEQG. CLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSH. . . AALCDFGHAVCLQPGT
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TT
BSS.S

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   470.........480..... ....490.........500.........510.........520......... 530.........540.....
 
   415....420.........430.........440.........450.........460.........470.........480.........490....
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Query Sequence  IYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEE
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Template Sequence  T. . . . . . . . . . . . HMAPEVVLGRSCDAKVDVWSSCCMMLHMLN. GCHPP. . . . . . . . . . . . . . . PVREIPPSCAPLT. AQ
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   561 ........570.........580.........590. ..... ...600......... 610.
 
   495....500.........510.........520....
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Query Sequence  VLLKCWDKTPDRRPTFDTLYHFFDDYFVST
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Template Sequence  AIQEGLRKEPIHRVSAAELGGKVNRALQQV
Template Known Secondary structure  T
SSTTTS

T
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   629630.........640.........650........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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