Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank201Aligned Residues222
% Identity27%Templatec2z7qA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of the n-terminal kinase domain of human rsk-1 bound2 to amp-pcp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280. ........290.........300.........310.........320.........330..
Predicted Secondary structure 







....


















Query SS confidence 
























. . . .


















































Query Sequence  IPRNQLHLKRKLGDGNFGEVWYGKW. . . . RGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYI
Query Conservation 
          

 
 

 
     ....     



              
   
  
 
 


   
         
Alig confidence 
























....










...............
























Template Conservation       
 
   

 
 

 

 
            
 

 ............... 
  
 




             
Template Sequence  ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL. . . . . . . . . . . . . . . ILADVNHPFVVKLHYAFQTEGKLYL
Template Known Secondary structure 

GGGTT
SSSSTT

...............






TTB

TT
Template Predicted Secondary structure 










...............








Template SS confidence 















































































   57..60.........70.........80.........90...... ...100.........110.........120.
 
   333......340.........350.........360.........370.........380.........390.........400.........410..
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  ITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLME
Query Conservation 
 
    


   
      
          


  
  

     
 


  



          

 




     
Alig confidence 
















.











































....










...
Template Conservation 
 
      
       .              
   
       
                 ....           ...
Template Sequence  ILDFLRGGDLFTRLSKE. VMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGH. . . . IKLTDFGLSKE. . .
Template Known Secondary structure 


TT
B.SS

TT


TT
SGGG
SSS
....
S


S

...
Template Predicted Secondary structure 













.























....










...
Template SS confidence 















































































   140.........150...... ...160.........170.........180.........190.........200 .........210.
 
   413......420.........430.........440.........450.........460.........470.........480.........490..
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  EDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIY
Query Conservation                 
 


          


 
 

 
 

 
 
  
            
        
        
Alig confidence  ...........

































.



















.











.
Template Conservation  ...........        
           





  



  .
  

           
   .    
   
   .
Template Sequence  . . . . . . . . . . . GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT. GSLPFQGKDRKETMTLILKA. KLGMPQFLSTEA.
Template Known Secondary structure  ...........

GGG

TTS


.SS
SS

SST.




TTS
.
Template Predicted Secondary structure  ...........






















.









.








.
Template SS confidence 















































































   224.....230.........240.........250....... ..260.........270....... ..280.........
 
   493......500....... ..510.....
Predicted Secondary structure 




.....

Query SS confidence 














. . . . .







Query Sequence  EEVLLKCWDKTPDRR. . . . . PTFDTLYH
Query Conservation    

  
    
  
.....

   
  
Alig confidence 














.....







Template Conservation    

   
  

  
          

 
Template Sequence  QSLLRALFKRNPANRLGSGPDGAEEIKR
Template Known Secondary structure 

SSTTTSTTSSSSTT
Template Predicted Secondary structure 






Template SS confidence 



























   290.........300.........310.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D