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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank83Aligned Residues248
% Identity26%Templatec2clqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 5; PDBTitle: structure of mitogen-activated protein kinase kinase kinase2 5
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.....260.........270.........280..... ....290.........300.........310.........320.........330..
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Query Sequence  NWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYI
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Template Sequence  EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP. . ERDSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI
Template Known Secondary structure 

B
TTSSB

SSSTTT

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T


TTB

TT
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   672.......680.........690.........700.........710.. .......720.........730.........740.........
 
   333......340.........350. ........360.........370.........380.........390.........400.........410
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Query Sequence  ITEYMINGSLLQYLRTDGS. . TLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKL
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Template Sequence  FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGV. . . LKISDFGTSKRL
Template Known Secondary structure 

STT


TT
TT



SGGGTTT

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S
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   753......760.........770.........780.........790.........800.........810....... ..820.........
 
   411........420.........430........ .440.........450.........460.........470 .........480......
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Query Sequence  MEEDIYEARTGAKFPIKWTAPEAATCGN. . FTVKSDVWSYGILLYEIMTKGQVPYPGMHNRE. . VVEQVELGYRMPMPRG
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Template Sequence  AGETF. . . . . . . TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT. GKPPFYELGEPQAAMFKVGMFKVHPEIPES
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GGG

GGGG
S.TS
TTGGGSS






TT
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   830.... .....840.........850.........860.........870. ........880.........890.........900.
 
   487..490.........500.........510.....
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Query Sequence  CPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  MSAEA. KAFILKCFEPDPDKRACANDLLV
Template Known Secondary structure  S
.TT
SSTTTS

T
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   907..910. ........920.........930....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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