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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank294Aligned Residues230
% Identity29%Templatec2oidA_
PDB info PDB header:transferaseChain: A: PDB Molecule:interleukin-1 receptor-associated kinase 4; PDBTitle: crystal structure of irak4 kinase domain complexed with2 amppnp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280.........290.........300.........310.........320.........330......
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Query Sequence  IPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEY
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Template Sequence  FDERPISVGGNKGEGGFGVVYKGYVNN. TTVAVK. . . . . . . . . . . . . KEIKVMAKCQHENLVELLGFS. . . . . . CLVYVY
Template Known Secondary structure  T

S
GGGTS


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   180.........190.........200...... ...210.. .......220.........230... ......
 
   337..340...... ...350.........360.........370.........380.........390.........400.........410....
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Query Sequence  MINGSLLQYL. . RTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEED
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Template Sequence  MPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFT. . . . AKISDFGLARASEVMR
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BTTGGG




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   265....270.........280.........290.........300.........310.........320.... .....330.........340
 
   415....420.........430.........440.........450.........460........ .470.........480
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Query Sequence  IYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHN. . . . . . . . . . . . . . REVVEQVELGYR
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Template Sequence  IVGTT. . . . . . . . AYMAPEALRGEITPKSDIYSFGVVLLEIIT. GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM
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   348.350.. .......360.........370.........380.. .......390.........400.........410........
 
   481........490.........500.........510.........520
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Query Sequence  MPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDY
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Template Sequence  NDADSTSVEAM. YSVASQCLHEKKNKRPDIKKVQQLLQEM
Template Known Secondary structure  S


.T
SSTTTS

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   419420......... 430.........440.........450.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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