Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank104Aligned Residues260
% Identity39%Templatec1xkkA_
PDB info PDB header:transferaseChain: A: PDB Molecule:epidermal growth factor receptor; PDBTitle: egfr kinase domain complexed with a quinazoline inhibitor-2 gw572016
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280. ........290.........300.........310.........320.........330.....
Predicted Secondary structure 







.


















Query SS confidence 
























.





















































Query Sequence  IPRNQLHLKRKLGDGNFGEVWYGKW. RGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITE
Query Conservation 
          

 
 

 
     .     



              
   
  
 
 


   
         

 
Alig confidence 
























.












..

































.



Template Conservation 
    
     

 
 

 



        



 
  ..        
   
  
 




            .    
Template Sequence  LKETEFKKIKVLGSGAFGTVYKGLWIPVKIPVAIKELRE. . KANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ. LITQ
Template Known Secondary structure 

TTT
SS





..
T


TTB

SSS.
Template Predicted Secondary structure 








..


















.



Template SS confidence 















































































   707..710.........720.........730.........740..... ....750.........760.........770......... 780...
 
   336...340.........350.........360.........370.........380.........390.........400.........410.....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  YMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDI
Query Conservation      


   
      
          


  
  

     
 


  



          

 




        
Alig confidence 


























































....














..
Template Conservation        
                          
                         ....               ..
Template Sequence  LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH. . . . VKITDFGLAKLLGAE. .
Template Known Secondary structure 

TT
BTSSS

TT


S


GGGTT....


STTTT..
Template Predicted Secondary structure 




































....














..
Template SS confidence 















































































   792.......800.........810.........820.........830.........840.........850 .........860.....
 
   416...420.........430.........440.........450.........460.........470.........480.........490.....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  YEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEEV
Query Conservation              
 


          


 
 

 
 

 
 
  
            
        
          
Alig confidence  ......





































































.


Template Conservation  ......                      

 
 

 



 
   
             
            
  
.  
Template Sequence  . . . . . . EKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDV. YMI
Template Known Secondary structure  ......



TTTS




TTS

TTTTS
GGGT





TTB
.
Template Predicted Secondary structure  ......










































.
Template SS confidence 















































































   866...870.........880.........890.........900.........910.........920.........930..... ...
 
   496...500.........510.........520.........530..
Predicted Secondary structure 
















Query SS confidence 




































Query Sequence  LLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPPS
Query Conservation 
  
    
  


   
   
             
 
Alig confidence 




































Template Conservation 
  

  

  


  


  
               
Template Sequence  MVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG
Template Known Secondary structure  T
SSGGGS

SB

TT
Template Predicted Secondary structure 













Template SS confidence 




































   947..950.........960.........970.........980...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D