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Job Description | G5EE56 | Confidence | 99.76% | Date | Fri May 3 21:16:22 BST 2013 |
Rank | 376 | Aligned Residues | 125 |
% Identity | 10% | Template | c1mv3A_ |
PDB info |
PDB header:endocytosis/exocytosis | Chain: A: PDB Molecule:myc box dependent interacting protein 1; |
PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc
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Resolution | UNK |
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6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | K | E | R | R | S | G | G | S | D | M | G | V | S | E | R | I | D | V | S | R | F | Q | T | P | Q | Q | Q | T | V | F | H | V | N | N | G | G | N | E | G | T | I | S | Q | L | N | G | T | S | D | G | M | M | G | N | G | R | G | G | G | G | G | G | G | A | Q | E | R | E | T | L | V | A | L | Y | P | Y | D | S | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | S | Q | P | A | E | A | S | E | V | A | G | G | T | Q | P | A | A | G | A | Q | E | P | G | E | T | A | A | S | E | A | A | S | S | S | L | P | A | V | V | V | E | T | F | P | A | T | V | N | G | T | V | E | G | G | S | G | A | G | R | L | D | L | P | P | G | F | M | F | K | V | Q | A | Q | H | D | Y | T | A | T |
Template Known Secondary structure |   |
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| S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
344 | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . |
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86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
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. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
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. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | D | G | D | L | S | F | Q | K | G | D | A | M | Y | L | L | . |
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D | H | S | N | C | D | W | W | Y | V | R | H | Q | R | . |
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T | G | Q | T | G | Y | V | P | R | N | F | V | A | K | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | T | D | E | L | Q | L | K | A | G | D | V | V | L | V | I | P | F | Q | N | P | E | E | Q | D | E | G | W | L | M | G | V | K | E | S | D | W | N | Q | H | K | K | L | E | K | C | R | G | V | F | P | E | N | F | T | E | R | V |
Template Known Secondary structure |   |
S | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
424 | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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