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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank257Aligned Residues231
% Identity23%Templatec2w4oA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type iv; PDBTitle: crystal structure of human camk4 in complex with 4-amino(2 sulfamoyl-phenylamino)-triazole-carbothioic acid (2,6-3 difluoro-phenyl)-amide)
Resolution2.17 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   251........260.........270.........280..... ....290.........300.........310.........320.........
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Query Sequence  TQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEP
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Template Sequence  DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK. . . . . . . . . . . KIGVLLRLSHPNIIKLKEIFETPTE
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SSB
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   35....40.........50.........60.........70........ .80.........90.........100...
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  FYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARK
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Template Sequence  ISLVLELVTGGELFDRIVEK. GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAP. DAPLKIADFGTP. .
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   114.....120.........130... ......140.........150.........160.........170....... ..180.........
 
   410.........420.........430.........440.........450.........460.........470........ .480.....
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Query Sequence  LMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELG. . . . YRMPMPR
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Template Sequence  . . . . . . . . . . . . . . . . . GYCAPEILRGCAYGPEVDMWSVGIITYILLC. GFEPFYDERGDQFMFRRILNCEYYFISPWWD
Template Known Secondary structure  .................GGS
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   206...210.........220.........230...... ...240.........250.........260.......
 
   486...490.........500.........510.....
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Query Sequence  GCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  EVSLNA. KDLVRKLIVLDPKKRLTTFQALQ
Template Known Secondary structure  TS
.TTS
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   268.270... ......280.........290......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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