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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank252Aligned Residues253
% Identity25%Templatec3kmuA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo)
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.....260.........270.........280.........290........ .300.........310.........320........
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Query Sequence  NWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMS. . . PEAFLQEAQIMKQCDHPNLVKLYAVCTREE. .
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Template Sequence  HSGIDFKQLNFLTKLNENHSGELWKGRWQG. NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP
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GGG
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   185....190.........200.........210.... .....220.........230.........240.........250.........260...
 
   329330.........340.........350.. .......360.........370...... ...380.........390.........400.....
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Query Sequence  PFYIITEYMINGSLLQYLRTDGST. LGIQALVDMAAQIANGMMYLEERK. . LVHRDLAARNVLVGDKISGVPVVKVADFG
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Template Sequence  HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXT. . . . ARISXAD
Template Known Secondary structure  S


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   264.....270.........280.........290.........300.........310.........320.........330.. .......
 
   406...410.........420.........430........ .440.........450.........460.........470..... ....480.
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Query Sequence  LARKLMEEDIYEARTGAKFPIKWTAPEAATCGN. . . FTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQV. ELGYRM
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Template Sequence  VKFSFQSPGR. . . . . . . XYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT. REVPFADLSNXEIGXKVALEGLRP
Template Known Secondary structure  S

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   340......... 350.........360.........370.........380....... ..390.........400.........410.
 
   482.......490.........500.........510.........520
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Query Sequence  PMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDY
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Template Sequence  TIPPGISPHV. SKLXKICXNEDPAKRPKFDXIVPILEKX
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TT

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   412.......420. ........430.........440.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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