Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence99.71%DateFri May 3 21:16:22 BST 2013
Rank388Aligned Residues101
% Identity38%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  KQQTIESEEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKRLDHDQGYFITT
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Template Sequence  HMQDLSVHLWYAGPMERAGAESILANR. . SDGTFLVRQRVKDAAEFAISIK. . . . . . YNVEVKHIKIMT. . AEGLYRITE
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   662.......670.........680........ .690.........700.........710 .........720.. .......730.
 
   209210.........220...... ...230.........
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Query Sequence  RRTFRSLQELVRYYSDVP. . . . . DGLCCQLTFPAPR
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Template Sequence  KKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE
Template Known Secondary structure  SSSSTTS
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   732.......740.........750.........760.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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