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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank181Aligned Residues250
% Identity16%Templatec3q60A_
PDB info PDB header:transferaseChain: A: PDB Molecule:rop5b; PDBTitle: crystal structure of virulent allele rop5b pseudokinase domain bound2 to atp
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LHLKRKLGDGNFGEVWYGKW. RGIVEVAIKTMKPGTMSPEA. . . . FLQEAQIMKQCDHPNLVKLYAVCTREE. . . . . . . .
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Template Sequence  LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGRLLLPSDAVAVQSQPPFAQLSP
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Query Sequence  . . . . . PFYIITEYMINGSLLQYLRT. . . . . . DGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVP
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Template Sequence  GYAVANYLLLMPAA. SVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR. . .
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Query Sequence  VVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAA. . TCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQV
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Template Sequence  . LMLGDVSALWKVG. . . . . TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC. LFLPFGLVTPGIKGSWK
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   403......410..... ....420.........430.........440.........450........ .460.........470.....
 
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Query Sequence  ELGYRMPMPR. . . . . . . . GCPEQIYEEVLLKCWDKTPDRRPTFDTLYH. . FFDDYFVS
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Template Sequence  RPSLRVPGTDSLAFGSCTPLPDFV. KTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE
Template Known Secondary structure  B

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   476...480.........490......... 500.........510.........520.........530..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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