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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank35Aligned Residues251
% Identity22%Templatec3c4yA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of apo form of g protein coupled receptor kinase 12 at 7.51a
Resolution7.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  WEIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKP. . . . GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEP
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Template Sequence  QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD
Template Known Secondary structure  S


GGGB





SSSTTTTTTT
TT


TTB

B

SS
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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   330.........340........ .350.........360.........370.........380.........390.........400......
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Query Sequence  FYIITEYMINGSLLQYLRT. . . DGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGL
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Template Sequence  LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN. . . . VRISDLGL
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S

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   260.........270.........280.........290.........300.........310.........320....... ..330.....
 
   407..410.........420.........430.........440.........450.........460...... ...470.........480....
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Query Sequence  ARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGM. . HNREVVEQVELGYRMPMP
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Template Sequence  AVEL. . KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGVENKELKQRVLE. QAVTYP
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B
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   336... 340.........350.........360.........370.........380.... .....390.........400..... ....410.
 
   485....490.........500....... ..510....
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Query Sequence  RGCPEQIYEEVLLKCWDKTPDRR. . . . . PTFDTLY
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Template Sequence  DKFSPAS. KDFCEALLQKDPEKRLGFRDGSCDGLR
Template Known Secondary structure  SS

.T
SSSSSS

S
TTSTTTTT
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   414.....420 .........430.........440.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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