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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank119Aligned Residues271
% Identity15%Templatec2kulA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase vrk1; PDBTitle: solution structure of human vaccinia related kinase 1(vrk1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIVE. . . . . . VAIKTMKPGTM. . . . . . . . . . . . SPEAFLQEAQIMKQCDHPNL
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Template Sequence  DMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV
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Query Sequence  VKLYAVCT. . . . REEPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKI
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Template Sequence  PKYWGSGLHDKNGKSYRFMIMDRF. GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN
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Query Sequence  SGVPVVKVADFGLARKLMEEDIYEARTGAK. . . . . FPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHN
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Template Sequence  PDQ. . VYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT. GHLPWEDNLK
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   190.. .......200.........210.........220.........230.........240.........250...... ...260......
 
   469470.........480.........490.........500.........510.........520.........530.
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Query Sequence  . . . . . . . . . . REVVEQVELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPP
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Template Sequence  DPKYVRDSKIRYRENIASLMDKCFPEKNKPGEI. AKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGK
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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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