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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank109Aligned Residues259
% Identity37%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280...... ...290........ .300.........310.........320........
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Query Sequence  IPRNQLHLKRKLGDGNFGEVWYGKWRGIVE. . . . VAIKTMKPGTMS. . . . PEAFLQEAQIMKQCDHPNLVKLYAVCTREE
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT. P
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GGG



B

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S



ST


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   121........130.........140.........150.........160.........170.........180.........190........ .
 
   329330.........340.........350.........360.........370.........380.........390.........400........
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Query Sequence  PFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLAR
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Template Sequence  PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL. . . . VKIGDFGLM.
Template Known Secondary structure  S



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SGGGSSSS
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   200.........210.........220.........230.........240.........250.........260..... ....270....
 
   409410.........420.........430.........440.........450.........460.........470....... ..480.......
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Query Sequence  KLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVEL. GYRMPMPRGC
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Template Sequence  . . . . . . . . . . . RALPVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC
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   275....280.........290.........300.........310.........320.........330.........340...
 
   488.490.........500.........510.........520.........530...
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Query Sequence  PEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPPSA
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Template Sequence  PQDI. YNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEE
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.T
SSGGGS

T




S
B

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   357..360 .........370.........380.........390.........400.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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