Return to main results Retrieve Phyre Job Id

Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank39Aligned Residues263
% Identity44%Templatec3kulB_
PDB info PDB header:transferaseChain: B: PDB Molecule:ephrin type-a receptor 8; PDBTitle: kinase domain of human ephrin type-a receptor 8 (epha8)
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270.........280...... ...290.... .....300.........310.........320.........
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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIVE. . . . VAIKTMKP. . GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEP
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Template Sequence  EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL
Template Known Secondary structure  B

GGGTTTTT
SS

TT


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   629630.........640.........650.........660.........670.........680.........690.........700........
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  FYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARK
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Template Sequence  AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV. . . . CKVSDFGLSRV
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   709710.........720.........730.........740.........750.........760.........770... ......780....
 
   410.........420.........430.........440.........450.........460.........470.........480.........
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Query Sequence  LMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPE
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Template Sequence  LEDDPDAATTGGKIPI. RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH
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   785....790.........800 .........810.........820.........830.........840.........850.........860...
 
   490.........500.........510.........520....
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Query Sequence  QIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVST
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Template Sequence  AL. HQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP
Template Known Secondary structure  .T
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   866. ..870.........880.........890.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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