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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank152Aligned Residues248
% Identity23%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280..... ....290... ......300.........310. ........320.........330
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Query Sequence  IPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMK. . . . PGTMSPEAFLQEAQIMKQ. CDHPNLVKLYAVCTREEPF
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL
Template Known Secondary structure 

STT
SSTTT

GGG

STTTTTTTSSTTB


B
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  YIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKL
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Template Sequence  FFVIEYVNGGDLMFHMQRQR. KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH. . . . IKLTDYGMCKEG
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BTTS.S

TT
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   320.........330......... 340.........350.........360.........370.........380.. .......390....
 
   411........420.........430.........440.........450.........460.........470.........480.........490
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Query Sequence  MEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQ
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Template Sequence  LRPGDTTSFCGTPN. . . YIAPEILRGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILE. KQIRIPRSMSVK
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TT

B


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GG...G

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   395....400........ .410.........420.........430........ .440.........450....... ..460.........
 
   491........500......... 510.....
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Query Sequence  IYEEVLLKCWDKTPDRRPT. . . . . . FDTLYH
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Template Sequence  A. ASVLKSFLNKDPKERLGCLPQTGFADIQG
Template Known Secondary structure  .T
SSSTTSTTTSTTT
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   480 .........490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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