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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank293Aligned Residues239
% Identity24%Templatec2qkrA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cdc2-like cdk2/cdc28 like protein kinase; PDBTitle: cryptosporidium parvum cyclin-dependent kinase cgd5_25102 with indirubin 3'-monoxime bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  LKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGSLL
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Template Sequence  MEKYLEKVGEGVVYKAKDSQ. RIVALKRIS. . . . . . . TAIREISLLKELHHPNIVSLIDVIHSECL. TLVFEFMEKDLKK
Template Known Secondary structure  S
B


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S
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   20.........30......... 40........ .50.........60.........70....... ..80.........90
 
   344.....350.........360.........370.........380.........390.........400.........410.........420...
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Query Sequence  QYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTGAK
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Template Sequence  VLDENKT. GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS. . . . . DALKLADFGLARAFGIPVRVVTLW. . .
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   108.110.... .....120.........130.........140.........150.... .....160.........170........
 
   424.....430.........440.........450.........460.........470.........480....
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Query Sequence  FPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMP. . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . YRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT. GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQV
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   185....190.........200.........210..... ....220.........230.........240.........250.........260
 
   485....490.........500.........510.........520.......
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Query Sequence  . . . . . . . . . . RGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPN
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Template Sequence  FEKKPWSSIIPGFCQEG. IDLLSNMLCFDPNKRISARDAMN. . HPYFKDLDPQ
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B

STT

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S
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T..SGGGTTS


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   261........270....... ..280.........290.........300 .........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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