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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank188Aligned Residues238
% Identity20%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280.........290......... 300.........310... ......320.........330.
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Query Sequence  IPRNQLHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMSP. . . EAFLQEAQIMKQCD. . HPNLVKLYAVCTREEPFY
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Template Sequence  VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY
Template Known Secondary structure  SSS
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   520.........530.........540.........550.........560.........570.........580.........590.........
 
   332.......340.........350.........360.........370.........380.........390.........400.........410.
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Query Sequence  IITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLM
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Template Sequence  MVMECGN. IDLNSWLKKKK. SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. . . . . GMLKLIDFGIA. . . .
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   600...... ...610....... ..620.........630.........640.........650....... ..660........
 
   412.......420.........430.........440.........450.........460....... ..470.........480.........
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Query Sequence  EEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMH. . NREVVEQVELGYRMPMPRGCPE
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Template Sequence  . . . . . . . . NQMVGTVNYMPPEAIKDMSISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK
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   669670.........680.........690.........700...... ...710.........720.........730.........
 
   490.........500.........510.....
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Query Sequence  QIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  DL. QDVLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  .T
SSTTTS

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   763. .....770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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