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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank170Aligned Residues241
% Identity22%Templatec3qd2B_
PDB info PDB header:gene regulationChain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280. ........290.. .......300.........310.........320.........330
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKW. RGIVEVAIKTM. . KPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPF. . . . . .
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Template Sequence  TDFEPIQCMGRG. FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM
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   587..590........ .600.........610.........620.........630.........640.........650.........660.....
 
   331........340.........350.. .......360.........370.........380.........390.........400.
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Query Sequence  . . . . . . . YIITEYMINGSLLQYLRTDGST. . LGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKV
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Template Sequence  DEPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV. . . . VKV
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   667..670.........680.........690.........700.........710.........720.........730......... 740..
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  ADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRM
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Template Sequence  GDFGLVTAMDQDTHG. . . . . . QVTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY. SFSTQ. . MERVRIITDVRNLKFP
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   952.......960...... ...970.........980.........990.........1000. ..... ...1010.........1020..
 
   482.......490.........500.........510.....
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Query Sequence  PMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  LLFTQKYPQE. HMMVQDMLSPSPTERPEATDIIE
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   10391040........ .1050.........1060.........1070.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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