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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank186Aligned Residues243
% Identity22%Templatec3i6wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase chk2; PDBTitle: structure and activation mechanism of the chk2 dna-damage checkpoint2 kinase
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.....260.........270.........280..... ....290.........300.........310.........320.........330..
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Query Sequence  NWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYI
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Template Sequence  DDQSVYPKALRDEYIMSKTLGEVKLAFERKTCKKVAIRIISKLN. . . . . VETEIEILKKLNHPCIIKIKNFFDAED. YYI
Template Known Secondary structure  S
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   207..210.........220.........230.........240.........250 .........260.........270....... ..280
 
   333......340.........350.........360.........370.........380.........390.........400.........410..
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Query Sequence  ITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLME
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Template Sequence  VLELMEGGELFDKVVGNK. RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE. DCLIKITDFGHSKILGE
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   300.........310....... ..320.........330.........340.........350.........360 .........370.......
 
   413......420.........430.........440.........450.........460..... ....470.........480.... ....
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Query Sequence  EDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPG. MHNREVVEQVELGYRMPMP. . . RGCP
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Template Sequence  TSLM. . . . . . . . . RPTYLAPEVLVAGYNRAVDCWSLGVILFICLS. GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS
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   378.380. ........390.........400.........410... ......420.........430.........440.......
 
   489490.........500.........510.....
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Query Sequence  EQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  EKA. LDLVKKLLVVDPKARFTTEEALR
Template Known Secondary structure  .S
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   457.. 460.........470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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