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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank36Aligned Residues251
% Identity22%Templatec3c4wB_
PDB info PDB header:transferaseChain: B: PDB Molecule:rhodopsin kinase; PDBTitle: crystal structure of g protein coupled receptor kinase 1 bound to atp2 and magnesium chloride at 2.7a
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKP. . . . GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPF
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Template Sequence  PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL
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   181........190.........200.........210.........220.........230.........240.........250.........260
 
   331........340........ .350.........360.........370.........380.........390.........400.......
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Query Sequence  YIITEYMINGSLLQYLRT. . . DGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLA
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Template Sequence  CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN. . . . VRISDLGLA
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   261........270.........280.........290.........300.........310.........320....... ..330......
 
   408.410.........420.........430.........440.........450.........460...... ...470.........480...
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Query Sequence  RKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGM. . . . HNREVVEQVELGYRMPM
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Template Sequence  VEL. . KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA. ARGPFRARGEKVENKELKQRVLE. QAVTY
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   337.. 340.........350.........360.........370.........380.... .....390.........400....... ..410..
 
   484.....490.........500....... ..510.....
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Query Sequence  PRGCPEQIYEEVLLKCWDKTPDRR. . . . . PTFDTLYH
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Template Sequence  PDKFSPAS. KDFCEALLQKDPEKRLGFRDGSCDGLRT
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   413......420 .........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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