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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank167Aligned Residues241
% Identity28%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKP. . GTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEY
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   337..340.........350.........360.........370.........380.........390.........400.........410......
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Query Sequence  MINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIY
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Template Sequence  YTGGELFDEIIKR. KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK. DCDIKIIDFGLSTCFQQNTTA
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   155....160....... ..170.........180.........190.........200.........210. ........220.........230..
 
   417..420.........430.........440.........450.........460.........470......... 480.........490...
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Query Sequence  EARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGY. . . RMPMPRGCPEQIYE
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Template Sequence  . . . . . . . . . . . YYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA. K
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GGGGGT


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   240.........250.........260......... 270.........280.........290.........300..... .
 
   494.....500.........510.....
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Query Sequence  EVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  DLIRKMLTFHPSLRITATQCLE
Template Known Secondary structure  T
SSTTTS

T
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   307..310.........320........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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