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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank150Aligned Residues241
% Identity21%Templatec3kl8C_
PDB info PDB header:transferase/ transferase inhibitorChain: C: PDB Molecule:calcium/calmodulin dependent protein kinase ii; PDBTitle: camkiintide inhibitor complex
Resolution3.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280. ........290.........300.........310.........320.........330........
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKW. RGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMI
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Template Sequence  DNYDV. . . . . KEELSVVRRCVHKTTGLEFAAKIINTD. . . FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT
Template Known Secondary structure  TT
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   11.... ....20.........30.........40.. .......50.........60.........70.........80..
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  NGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEA
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Template Sequence  GGELFEDIVARE. FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK. GAAVKLADFGLAIEVNDSEAWHG
Template Known Secondary structure  S
BS.S

TTT
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TT


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B


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   94.....100..... ....110.........120.........130.........140........ .150.........160.........170.
 
   419420.........430.........440.........450.........460.........470.........480..... ....490.....
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Query Sequence  RTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPR. . . GCPEQIYEEV
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Template Sequence  FAGTPG. . . YLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA. KSL
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S
TT...T

TT

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TTGGGGS
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   172..... ..180.........190.........200....... ..210.........220.........230.........240... ...
 
   496...500.........510.....
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Query Sequence  LLKCWDKTPDRRPTFDTLYH
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Template Sequence  IDSMLTVNPKKRITADQALK
Template Known Secondary structure  TTS
SSGGGS

TT
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   247..250.........260......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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