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Job DescriptionG5EE56
Confidence99.72%DateFri May 3 21:16:22 BST 2013
Rank386Aligned Residues119
% Identity21%Templatec2izvA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160.........170.........180.........190.........200
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Query Sequence  YVPRNFVAKQQTIESEEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKRLDH
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Template Sequence  YFQSMLVPDLLQINNNPCYWGVMDKYAAEALLEGK. . PEGTFLLRDSAQEDYLFSVSFR. . . . . . RYSRSLHARIEQ. . W
Template Known Secondary structure  S

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   269270.........280.........290.........300... ......310.........320..... ....330....... .
 
   201........210 .........220.........230.........240.........
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Query Sequence  DQGYFITTRR. . . . TFRSLQELVRYYSDVPDGLCCQLTFPAPRLAPTRPDLSH
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Template Sequence  NHNFSFDAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIRTFPFSLQH
Template Known Secondary structure  TTS
TT
TTS

BSST

GGG

TTS







S


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   339340.........350.........360.........370.........380.........390.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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