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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank253Aligned Residues230
% Identity24%Templatec3famA_
PDB info PDB header:transferaseChain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270 .........280... ......290.........300.........310.........320.........330.........340..
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Query Sequence  KRKLGD. GNFGEVWYGKWRG. IVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGSL
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Template Sequence  GAHIGNYQIVKKVKLAYHTTTGQKVALKIINKKVM. QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG. NEL
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   4950.........60.........70.........80... ......90.........100.........110.........120... ...
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  LQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEARTGA
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Template Sequence  FDYIVQR. DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLN. . . . VKIADFGL. . . . . . . . . . . . . . . .
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   140...... ...150.........160.........170.........180.........190 ........
 
   423......430.........440.........450.........460.........470.........480.........490.........500..
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Query Sequence  KFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEEVLLKCWDK
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Template Sequence  . . . . . . SPNYAAPEVISGPEVDVWSCGVILYVMLC. RRLPFDDESIPVLFKNISNG. VYTLPKFLSPGA. AGLIKRMLIV
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   199200.........210.........220....... ..230.........240....... ..250......... 260.........
 
   503......510.........520........
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Query Sequence  TPDRRPTFDTLYHFFDDYFVSTQPNY
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Template Sequence  NPLNRISIHEIMQD. . DWFKVDLPEY
Template Known Secondary structure  SGGGS

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   290.........300... ......310...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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