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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank161Aligned Residues240
% Identity23%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGT. . . . . . . MSPEAFLQEAQIMKQCD. . HPNLVKLYAVCTREEP
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Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS
Template Known Secondary structure  TTTTTTGGG



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   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  FYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARK
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Template Sequence  FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN. . . RGELKLIDFGSGAL
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Query Sequence  LMEEDIYEARTGAKFPIKWTAPEAATCGN. FTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCP
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Template Sequence  LKDTVYTDFDGTRV. . . . YSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVS
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   193......200...... ...210.........220.........230....... ..240....... ..250.........260
 
   489490.........500.........510.....
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Query Sequence  EQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  SEC. QHLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  .T
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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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