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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank235Aligned Residues252
% Identity23%Templatec4fr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine/threonine-protein kinase 32a; PDBTitle: crystal structure of human serine/threonine-protein kinase 32a (yank1)
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMK. . . . PGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPF
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Template Sequence  DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  YIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKL
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Template Sequence  FMVVDLLLGGDLRYHLQQNV. HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH. . . . VHITDFNIAAML
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   97..100.........110...... ...120.........130.........140.........150......... 160.........170.
 
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Query Sequence  MEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVEL. . GYRMPMPRGCP
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Template Sequence  PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR. GRRPYHIRSSTSSKEIVHTFETTVVTYPSAWS
Template Known Secondary structure 
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   172.......180.........190.........200.........210........ .220.........230.........240.........250
 
   489490.........500......... 510....
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Query Sequence  EQIYEEVLLKCWDKTPDRRPT. FDTLY
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Template Sequence  QEM. VSLLKKLLEPNPDQRFSQLSDVQ
Template Known Secondary structure  .S
SSTTTS

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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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