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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank264Aligned Residues237
% Identity25%Templatec3zduA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cyclin-dependent kinase-like 3; PDBTitle: crystal structure of the human cdkl3 kinase domain
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280. ........290.........300.........310.........320.........330........
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Query Sequence  NQLHLKRKLGDGNFGEVWYGKW. RGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMI
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Template Sequence  EMYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFYN. . . . . KIAMREIKFLKQFHHENLVNLIEVFRQKKKIHLVFEFID
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TTTTT




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   2.......10.........20.........30....... ..40.........50.........60.........70......
 
   339340.........350.........360.........370.........380.........390.........400.........410........
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Query Sequence  NGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYEA
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Template Sequence  HTVLDELQHYCH. GLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQSGI. . . . TKLCDFGFARTDIYDDEVAT
Template Known Secondary structure  STT.S

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   84.....90..... ....100.........110.........120.........130........ .140.........150........
 
   419420.........430........ .440.........450.........460.........470.........480.....
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Query Sequence  RTGAKFPIKWTAPEAATCGN. FTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPMPR. . . . . . . . . . . .
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Template Sequence  RW. . . . . . . YRAPELVLKDTSYGKPVDIWALGCMIIEMAT. GNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFA
Template Known Secondary structure  T.......T

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   164. ....170.........180.........190...... ...200.........210.........220.........230.....
 
   486...490.........500.........510.....
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Query Sequence  . . . . . . . . . . . . . . . . . . GCPEQIYEEVLLKCWDKTPDRRPTFDTLYH
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Template Sequence  GVVLPQVQHPKNARKKYPKLNGLL. ADIVHACLQIDPADRISSSDLLH
Template Known Secondary structure  T








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T
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   236...240.........250......... 260.........270.........280..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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