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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank121Aligned Residues268
% Identity24%Templatec2vd5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:dmpk protein; PDBTitle: structure of human myotonic dystrophy protein kinase in2 complex with the bisindoylmaleide inhibitor bim viii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKPGTMSPEA. . . . FLQEAQIMKQCDHPNLVKLYAVCTREEPF
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Template Sequence  RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL
Template Known Secondary structure  S

GGG
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  YIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKL
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Template Sequence  YLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGH. . . . IRLADFGSCLKL
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Query Sequence  MEEDIYEARTGAKFPIKWTAPEAA. . . . . . . TCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMPM
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Template Sequence  . RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY. GQTPFYADSTAETYGKIVHYKEHLS
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   221........230.........240.........250.........260.........270... ......280.........290........
 
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Query Sequence  PRGCPEQIYEEVLLKCWDKTPDRR. . . PTFDTLYH. . FFDDYFVSTQPNYAPP
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Template Sequence  LPGVPEEA. RDFIQRLLC. PPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPP
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GGG
TTTTTTSGGGTT

STTSTTS

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   299300...... ...310..... ....320.........330.........340.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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