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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank21Aligned Residues261
% Identity23%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TRPDLSHDTQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGIV. EVAIKTMKP. . . . GTMSPEAFLQEAQIMKQC. DHPN
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Template Sequence  LLSQEEGEYFNVPVPPLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF
Template Known Secondary structure 
B
TTGGGT





TTSSBTTTB
SSS

TTTTT
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TT
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   277..280.........290.........300.........310.........320.........330.........340.........350......
 
   317..320.........330.........340.........350.........360.........370.........380.........390......
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Query Sequence  LVKLYAVCTREEPFYIITEYMINGSLLQYLRTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGV
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Template Sequence  LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG. RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGH. .
Template Known Secondary structure  B



B
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   403......410.........420.........430...... ...440.........450.........460.........470.........
 
   397..400.........410.........420.........430.........440.........450.........460.........470......
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Query Sequence  PVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVE
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Template Sequence  . . IKIADFGMCKENIWDGVTTKFCGTPD. . . YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPFEGEDEDELFQSIM
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TT



TT

B


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SS...S

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   480.........490.........500..... ....510.........520.........530..... ....540.........550...
 
   477..480.........490.........500.........510 ....
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Query Sequence  LGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTF. . . . . DTLY
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Template Sequence  EH. NVAYPKSMSKEA. VAICKGLMTKHPGKRLGCGPEGERDIK
Template Known Secondary structure  SS.




TTS
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SSSTT
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   555. ...560........ .570.........580.........590.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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