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Job DescriptionG5EE56
Confidence100.00%DateFri May 3 21:16:22 BST 2013
Rank278Aligned Residues245
% Identity18%Templatec3ll6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:cyclin g-associated kinase; PDBTitle: crystal structure of the human cyclin g associated kinase (gak)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EIPRNQLHL. KRKLGDGNFGEVWYGKWRGIV. EVAIKTMK. PGTMSPEAFLQEAQIMKQCD. HPNLVKLYAVCTREEPF.
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Template Sequence  TVELGELRLRVRRVLAEGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES
Template Known Secondary structure  TT


TTT

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Query Sequence  . . . . . . YIITEYMINGSLLQYL. . RTDGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVA
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Template Sequence  DTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT. . IKLC
Template Known Secondary structure  TTSS


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Query Sequence  DFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRMP
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Template Sequence  DFGSATTISHYPDT. . . . . . . . . . . . PEIIDYSNFPIGEKQDIWALGCILYLLCF. RQHPFESIPP. . . . . . . . . . . . . .
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   181........190.... .....200.........210.........220... ......230...
 
   483......490.........500.........510.........520.........530.
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Query Sequence  MPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFDDYFVSTQPNYAPP
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Template Sequence  . HDTQYTVF. HSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSP
Template Known Secondary structure  .T

SS.S
SSGGGS

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Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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