Job Description O45498 Confidence 99.79% Date Sat Apr 13 13:01:14 BST 2013 Rank 94 Aligned Residues 86 % Identity 20% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																			.																.	.	.	.
Query SS confidence																																																			.																.	.	.	.
Query Sequence		C	S	D	L	Y	D	C	D	W	Y	W	G	D	L	D	W	K	W	A	E	R	L	L	L	L	C	P	I	G	Y	F	L	I	R	D	S	R	S	E	T	H	L	F	T	V	S	Y	H	F	.	Q	D	R	V	Y	H	S	R	L	S	L	E	D	S	R	.	.	.	.	R	N	L	G	S	R	Q	P	Y	V	S
Query Conservation																																																			.																.	.	.	.
Alig confidence													.																																						.																.	.	.	.						.	.	.	.	.	.
Template Conservation													.																																																															.	.	.	.	.	.
Template Sequence		X	H	R	V	I	N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	.	.	.	.	.	.
Template Known Secondary structure							T		T	T	B		.												T	T	S		T	T									S	T	T											T	T																				S	S	S	.	.	.	.	.	.
Template Predicted Secondary structure													.																																																															.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Y	W	N	L	V	E	I	I	E	R	S	L	E	Q	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D