Job Description O45498 Confidence 99.64% Date Sat Apr 13 13:01:14 BST 2013 Rank 101 Aligned Residues 85 % Identity 15% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		N	K	V	I	C	S	D	L	Y	D	C	D	W	Y	W	G	D	L	D	W	K	W	A	E	R	L	L	L	L	C	P	I	G	Y	F	L	I	R	D	S	R	S	E	T	H	L	F	T	V	S	Y	H	F	Q	D	R	V	.	Y	H	S	R	L	S	L	E	D	S	R	R	N	L	G	S	R	Q	P	Y	V	S
Query Conservation																																																											.
Alig confidence																	.														.														.														.																	.	.	.	.	.	.
Template Conservation																	.														.														.																															.	.	.	.	.	.
Template Sequence		M	K	Y	T	N	P	R	F	Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	S	T	D	D	F	L	I	R	K	G	S	R	H	.	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E	E	H	S	E	H	Y	T	C	S	N	.	.	.	.	.	.
Template Known Secondary structure				S	S			G	G	G	G	S	T	T			.														.	S	S									S	S	T	.	T										T	T											S	S					T	T	.	.	.	.	.	.
Template Predicted Secondary structure																	.														.														.																															.	.	.	.	.	.
Template SS confidence
		782	.	.	.	.	.	.	.	790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.		810	.	.	.	.	.	.	.	.	.	820	.	.		.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Y	W	N	L	V	E	I	I	E	R	S	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R
Template Known Secondary structure					S	S								T
Template Predicted Secondary structure
Template SS confidence
		853	.	.	.	.	.	.	860	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D