Return to main results Retrieve Phyre Job Id

Job DescriptionO45498
Confidence99.92%DateSat Apr 13 13:01:14 BST 2013
Rank17Aligned Residues105
% Identity23%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  CSDLYDCDWYWGDLDWKWAERLLLLCPIGYFLIRDSRSETHLFTVSYHFQDRVYHSRLSLEDSRRNLGSRQPYVSRDYWN
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Template Sequence  MQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITE. . . . . KKAFRG
Template Known Secondary structure  SS
STTSSSS

S
TTB

SSS
S
SSS
TTSSS.....SSSS
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   663......670.........680.........690.........700.........710.........720.........730. ......
 
   88.90.........100.........110.........120........
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Query Sequence  LVEIIERSLEQSLTGQQEMLHYRRGHEAEAARVNLTRPLTK
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Template Sequence  LTELVEFYQQNSL. . . . . . . . . . . KDCFKSLDTTLQFPFKE
Template Known Secondary structure  TTS
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B
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   738.740.........750 .........760.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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