Job Description O45498 Confidence 100.00% Date Sat Apr 13 13:01:14 BST 2013 Rank 1 Aligned Residues 143 % Identity 29% Template c2c9wA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution Resolution 1.9 Å Model Dimensions (Å) X:48.554 Y:50.839 Z:33.751

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		C	S	D	L	Y	D	C	D	W	Y	W	G	D	L	D	W	K	W	A	E	R	L	L	L	L	C	P	I	G	Y	F	L	I	R	D	S	R	S	E	T	H	L	F	T	V	S	Y	H	F	Q	D	R	V	Y	H	S	R	L	S	L	E	D	S	R	R	N	L	G	S	R	Q	.	.	P	Y	V	S	R	D	Y
Query Conservation																																																																									.	.
Alig confidence																																																																									.	.
Template Conservation
Template Sequence		L	R	E	L	G	Q	T	G	W	Y	W	G	S	M	T	V	N	E	A	K	E	K	L	K	E	A	P	E	G	T	F	L	I	R	D	S	S	H	S	D	Y	L	L	T	I	S	V	K	T	S	A	G	P	T	N	L	R	I	E	Y	Q	D	G	K	F	R	L	D	S	I	I	C	V	K	S	K	L	K	Q	F
Template Known Secondary structure								T	S		B		T	T											T	T	S		T	T									S	T	T		S								T	T											T	T						T	T	T	T	T	G	G	G				B
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	N	L	V	E	I	I	E	R	S	L	E	Q	S	L	T	G	Q	Q	E	M	L	H	Y	R	R	G	H	E	A	E	A	A	R	V	N	L	T	R	P	L	T	K	R	E	L	L	P	S	L	Q	Y	L	C	R	F	T	L	K	T	S	Q	Q	K	P	P	T	P	K	T	A	P	L	P	P	T	I	L	K	Y
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																			.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																			.	.	.
Template Sequence		D	S	V	V	H	L	I	D	Y	Y	V	Q	M	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	Y	L	T	K	P	L	Y	.	.	T	S	A	P	S	L	Q	H	L	C	R	L	T	I	N	K	C	T	.	.	.	G	A	I	W	G	L	P	L	P	T	R	L	K	D	Y
Template Known Secondary structure		S													T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							B			.	.	S	S																	.	.	.	S		G	G	G	S	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																			.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																			.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		166	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	S	K	W	I	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	Y	K	F	Q	V
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D