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Job DescriptionO45498
Confidence99.89%DateSat Apr 13 13:01:14 BST 2013
Rank49Aligned Residues101
% Identity27%Templatec1x6cA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: solution structures of the sh2 domain of human protein-2 tyrosine phosphatase shp-1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30... ......40.........50......... 60.........70.........80
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Query Sequence  LYDCDWYWGDLDWKWAERLLLLC. PIGYFLIRDSRSETHLFTVSYHFQDR. . . . . . . . . VYHSRLSLEDSRRNLGSRQPY
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Template Sequence  SGSSGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTV. . . . . G
Template Known Secondary structure  S






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   3......10.........20.........30.........40.........50.........60.........70...... .
 
   81........90.........100.........110.........120........
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Query Sequence  VSRDYWNLVEIIERSLEQSLTGQQEMLHYRRGHEAEAARVNLTRPLTK
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Template Sequence  GLETFDSLTDLVEHFKKTGI. . . . . . . . . . . . EEASGAFVYLRQPYYS
Template Known Secondary structure  SS

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   78.80.........90....... ..100.........110...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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