Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank83Aligned Residues250
% Identity23%Templated1xjda_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340........ .350.........360. ........370.........380...
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMP. . . . LHEFLAEAAIMKD. LHHKNLVRLLGVCTHEAPFYII
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Template Sequence  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV
Template Known Secondary structure  TT
SSSTTTTTT
TT
TTB


SS
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   378.380.........390.........400.........410.........420.........430.........440.........450.......
 
   384.....390.........400.........410.........420.........430.........440.........450.........460...
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Query Sequence  TEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYT
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Template Sequence  MEYLNGGDLMYHIQSCHK. . FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK
Template Known Secondary structure 

TT
BSS..

TT
B




GGG
TTS



TT
B



TT

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   458.460.........470..... ....480.........490.........500.........510.........520.........530.....
 
   464.....470.........480.........490.........500.........510.........520.........530.........540...
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Query Sequence  AHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDGPQGCPPSVYRLMLQ
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Template Sequence  TN. . FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMD. NPFYPRWLEKEAKDLLVK
Template Known Secondary structure  B
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S
GGG

TT

B
T.SS
SS

SS
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   536. ..540.........550.........560.........570... ......580.........590... ......600.........610.
 
   544.....550..... ....560....
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Query Sequence  CWNWSPSDRPRF. RDIHFNLEN
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Template Sequence  LFVREPEKRLGVRGDIRQHPLF
Template Known Secondary structure  S
SSGGGSBTTBS
GGGSGGG
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   613......620.........630....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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