Return to main results Retrieve Phyre Job Id

Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank58Aligned Residues252
% Identity19%Templated1phka_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   308.310.........320.........330.........340..... ....350.........360... ......370......
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Query Sequence  RSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKED. . . . . . . . . . AMPLHEFLAEAAIMKDLH. HKNLVRLLGVCTH
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Template Sequence  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET
Template Known Secondary structure  TTT
SSTTTTTT
STT

TT
TTB


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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   377..380.........390.........400.........410.........420.........430.........440.........450......
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Query Sequence  EAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARF
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Template Sequence  NTFFFLVFDLMKKGELFDYLTEKVT. . LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ
Template Known Secondary structure  SS

TT
BSS..

TT
S

SGGG
TT




TT
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   96...100.........110.........120 .........130.........140.........150.........160.........170...
 
   457..460.........470.........480. ........490.........500.........510.........520.... ...
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Query Sequence  MKEDTYTAHAGAKFPIKWTAPEGLA. . . . . . FNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENG. . . FRM
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Template Sequence  LDPGEKLRE. . VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA. GSPPFWHRKQMLMLRMIMSGNYQFGS
Template Known Secondary structure 

TT

B

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GGG


TTS

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SS

SST




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   174.....180.. .......190.........200.........210.........220.... .....230.........240.........250
 
   528.530.........540.........550.........560....
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Query Sequence  DGPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF
Template Known Secondary structure  TTGGGS


SSGGGS

TTSGGG
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   251........260.........270.........280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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