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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank135Aligned Residues249
% Identity24%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340... ......350.........360.........370.........380....
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . . EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIIT
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Template Sequence  ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM
Template Known Secondary structure  TTTTTTT



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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   385....390.........400.........410.........420.........430.........440.........450.........460....
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Query Sequence  EFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTA
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Template Sequence  EYIEGPTLSEYIESHGP. . LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . .
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   88.90.........100.... .....110.........120.........130.........140.........150.....
 
   465....470.........480.........490.........500.........510.........520........ .530.........540
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Query Sequence  HAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMD. . . . GPQGCPPSVYRL
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Template Sequence  . . . . . KTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNV
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   156...160.........170.........180......... 190.........200.........210.........220.........
 
   541........550.. .......560.........570.....
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Query Sequence  MLQCWNWSPSDR. PRFRDIHFNLENLISSNSLNDEV
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Template Sequence  ILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDV
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   245....250.........260.........270.........280
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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