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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank195Aligned Residues240
% Identity23%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  LDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITE
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVME
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TTT


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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   386...390.........400.........410.........420.........430.........440... ......450.........460...
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Query Sequence  FMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEH. . NIVKIADFGLARFMKEDTYT
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Template Sequence  YASGGELFERICNAGR. . FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . . . . . . .
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TT
BSSS..

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   96...100.........110. ........120.........130.........140.........150.........160...
 
   464.....470.........480.........490.........500.........510.........520.... .....530........
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Query Sequence  AHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENG. . . . . FRMDGPQGCPPSVY
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Template Sequence  . . . . . . TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR
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   179180.........190.........200.........210.. .......220.........230.........240.........250.
 
   539540.........550.........560....
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Query Sequence  RLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  HLISRIFVADPAKRISIPEIRNHEWF
Template Known Secondary structure  S
SSGGGS

TT
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   252.......260.........270.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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