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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank149Aligned Residues263
% Identity17%Templatec3sv0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:casein kinase i-like; PDBTitle: crystal structure of casein kinase-1 like protein in plant
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340.........350.........360.........370.........380........
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMC
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Template Sequence  NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH. PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL
Template Known Secondary structure  TT





SS
TTT

TT
SS.

TTTSTT


TT

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   7..10.........20.........30.........40...... ...50.........60.........70.........80.....
 
   389390.........400.........410.........420.........430.........440.. .......450.........460.....
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Query Sequence  NGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSE. . . HNIVKIADFGLARFMKEDTYTAH
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Template Sequence  GPSLEDLFNFCSRK. LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH
Template Known Secondary structure 

BTTT
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TT




GGG

GGGTT



TT

B
TTT

B
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   86...90......... 100.........110.........120.........130.........140.........150.........160....
 
   466. ..470.........480.........490.........500.........510.... .....520.........530..
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Query Sequence  AG. . . . . . AKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVEL. . . . . . . SNVYGLLENGFRMDGPQG
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Template Sequence  IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR. GSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRG
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S
TTT

TT



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   165....170.........180.........190.........200........ .210.........220.........230.........240...
 
   533......540.........550.........560.........570....
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Query Sequence  CPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNSLNDE
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Template Sequence  YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFD
Template Known Secondary structure  S
T

TT



TT


S
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   244.....250.........260.........270.........280.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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