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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank28Aligned Residues243
% Identity25%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   313......320.........330.........340.........350.........360.........370.........380.........390..
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Query Sequence  MHNKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNL
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Template Sequence  YFKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL
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   57..60.........70.........80.........90 .........100.........110.........120.........130....
 
   393......400.........410.........420.........430.........440 .........450.........460.........
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Query Sequence  LEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLV. . . SEHNIVKIADFGLARFMKEDTYTAHAGAK
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Template Sequence  FEQIINRHK. . FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD. . RL
Template Known Secondary structure  S
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   153......160. ........170.........180.........190.........200.........210.........220...... ..
 
   470.........480.........490.........500.........510.........520.........530 .........540.....
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Query Sequence  FPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDGP. . . . QGCPPSVYRLMLQCW
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Template Sequence  GTAYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGK. YYFDFNDWKNISDEAKELIKLML
Template Known Secondary structure  S
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   229230.........240. ........250.........260. ........270.........280.. .......290.........300.....
 
   546...550.........560....
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Query Sequence  NWSPSDRPRFRDIHFNLEN
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Template Sequence  TYDYNKRCTAEEALNSRWI
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   306...310.........320....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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