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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank304Aligned Residues264
% Identity21%Templatec3pg1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase, putative (map kinase-like PDBTitle: map kinase lmampk10 from leishmania major (1.95 angs resolution)
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340... ......350.........360.........370......
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . . . . . . . . . . EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTH
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Template Sequence  SPYTVQRFISSGSYGAVCAGVDS. EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH
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   21........30.........40... ......50.........60.........70.........80.........90.........
 
   377 ..380.........390.........400.........410.........420.........430.........440.........450.
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Query Sequence  E. . . . . APFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADF
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Template Sequence  FEEPAMHKLYLVTELMRTDLAQVIHDQRIV. . ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF
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TTT



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   100.........110.........120......... 130.........140.........150.........160.........170.......
 
   452.......460.........470.........480.........490.........500.........510.........520........
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Query Sequence  GLARFMKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMD. . .
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Template Sequence  NLHR. . . . . . . . . . . . . . . . WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN. RKALFRGSTFYNQLNKIVEVVGTPKIE
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   178.180. ........190.........200.........210... ......220.........230.........240
 
   529530.........540.........550.........560.........570.........580
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . GPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLENLISSNSLNDEVQKQLK
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Template Sequence  DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSER
Template Known Secondary structure  TS
TTT








STTS
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TSGGGTTT

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   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   581........590..
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Query Sequence  KNNDKKLESDKR
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Template Sequence  FHFDESVTDVYD
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TT


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   336...340.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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