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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank287Aligned Residues242
% Identity22%Templatec3n9xA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphotransferase; PDBTitle: crystal structure of map kinase from plasmodium berghei, pb000659.00.0
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320.........330.........340... ......350.........360.........370....... ..380
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Query Sequence  SEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHE. . . . . APF
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Template Sequence  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL
Template Known Secondary structure  TTTTTTTT
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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   381........390.........400.........410.........420.........430.........440.........450.........460
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Query Sequence  YIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARFMKED
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Template Sequence  YIVLEIADSDLKKLFKTPIF. . . LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR. . . . .
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   106...110.........120..... ....130.........140.........150.........160.........170.......
 
   461........470.........480..... ....490.........500.........510...
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Query Sequence  TYTAHAGAKFPIKWTAPEGLAFNTF. SSKSDVWAFGVLLWEIATYGMAPYPGVE. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . TIHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN. MLQSHINDPTNRFPLFPGSSCFPHEKSNRDQLNII
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   178.180.........190.........200.........210...... ...220.........230.........240.........250.
 
   514.....520........ .530.........540.........550.........560....
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Query Sequence  . . . . . . . . . . . . . . . . . . . LSNVYGLLENGFRMD. . . GPQGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  FNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL
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   293......300.........310.........320.........330.........340.........350.........360.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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