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Job DescriptionP03949
Confidence100.00%DateFri May 3 21:46:51 BST 2013
Rank217Aligned Residues256
% Identity20%Templatec3lm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase 17b; PDBTitle: crystal structure of human serine/threonine kinase 17b (stk17b)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   297..300.........310.........320.........330.........340... ......350.........360... ......370..
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Query Sequence  SPNAPDEWELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK. . . EDAMPLHEFLAEAAIMKDLH. HKNLVRLLG
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Template Sequence  NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE
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SB

SSTTT

STT
TTT
TTB

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   1920.........30.........40.........50.........60.........70.........80.........90........
 
   373......380.........390.........400.........410.........420.........430.........440... ......
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Query Sequence  VCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEH. . . NIVKIA
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Template Sequence  VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIV
Template Known Secondary structure 
SS

TTGGGGGSGGG
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TT
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GGGS
BTTB


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   99100.........110.........120.........130.........140.........150.........160.........170........
 
   450.........460.........470.........480.........490.........500.........510.........520.........
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Query Sequence  DFGLARFMKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDG
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Template Sequence  DFGMS. . . . . . . . . . . RKIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT. HTSPFVGEDNQETYLNISQVNVDYS
Template Known Secondary structure 

TT
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SGGG

TT



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   179180... ......190.........200.........210.........220. ........230.........240......
 
   530 .........540.........550.........560....
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Query Sequence  P. . . QGCPPSVYRLMLQCWNWSPSDRPRFRDIHFNLEN
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Template Sequence  EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL
Template Known Secondary structure  TTS
S
SSGGGS

T
GGG
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   256...260.........270.........280.........290...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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